RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PCMTD2Q9NV79 361 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 TMEM248Q9NWD8 314 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 SAGE1Q9NXZ1 904 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 ZFATQ9P243 1243 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 SLC17A6Q9P2U8 582 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 GSRP00390 522 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 BGNP21810 368 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 ADRA1AP35348 466 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 SLC20A2Q08357 652 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 OTOP3Q7RTS5 596 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 DNAAF3Q8N9W5 541 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 STKLD1Q8NE28 680 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 ZNF669Q96BR6 464 aaPredicted RBP18.01■□□□□ 0.47
SFXN1-208ENST00000507823 C7orf26Q96N11 449 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 PGLYRP2Q96PD5 576 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 DONSONQ9NYP3 566 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18■□□□□ 0.47
SFXN1-208ENST00000507823 PEX11BO96011 259 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 ERVK-10P10266 1014 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 RING1Q06587 406 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 CDK18Q07002 472 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 MS4A13Q5J8X5 152 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 CERCAMQ5T4B2 595 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 TEDDM1Q5T9Z0 273 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 FBXW10Q5XX13 1052 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 ANKS3Q6ZW76 656 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 ASRGL1Q7L266 308 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 CEP57Q86XR8 500 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 RBBP8Q99708 897 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 TTLL2Q9BWV7 592 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 CRISPLD1Q9H336 500 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 GGT7Q9UJ14 662 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 LRFN2Q9ULH4 789 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 SCN5AQ14524 2016 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 GLRA3O75311 464 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 PARNO95453 639 aaKnown RBP18■□□□□ 0.47
SFXN1-208ENST00000507823 BPGMP07738 259 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 VEGFBP49765 207 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 RTP2Q5QGT7 225 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 DENND5AQ6IQ26 1287 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 ATP6V0D2Q8N8Y2 350 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 FBXO32Q969P5 355 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 BTN2A3PQ96KV6 586 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 SLC13A1Q9BZW2 595 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 UNC93B1Q9H1C4 597 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 TLR8Q9NR97 1041 aaKnown RBP18■□□□□ 0.47
SFXN1-208ENST00000507823 ZNF212Q9UDV6 495 aa18■□□□□ 0.47
SFXN1-208ENST00000507823 DRGXA6NNA5 263 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 PAPOLAP51003 745 aaKnown RBP17.99■□□□□ 0.47
SFXN1-208ENST00000507823 LIMK2P53671 638 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 GEMP55040 296 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 MTA1Q13330 715 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 PDE1CQ14123 709 aaPredicted RBP17.99■□□□□ 0.47
SFXN1-208ENST00000507823 CES3Q6UWW8 571 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 ARMC2Q8NEN0 867 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 TRIM55Q9BYV6 548 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 MYLK2Q9H1R3 596 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 ECT2Q9H8V3 914 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 MRM3Q9HC36 420 aaKnown RBP17.99■□□□□ 0.47
SFXN1-208ENST00000507823 ALG13Q9NP73 1137 aaKnown RBP17.99■□□□□ 0.47
SFXN1-208ENST00000507823 DCDC2Q9UHG0 476 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 EMCNQ9ULC0 261 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 OGDHLQ9ULD0 1010 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 TPP1O14773 563 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 SNNO75324 88 aaPredicted RBP17.99■□□□□ 0.47
SFXN1-208ENST00000507823 MOCS2O96007 188 aaPredicted RBP17.99■□□□□ 0.47
SFXN1-208ENST00000507823 CSRP3P50461 194 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 CSE1LP55060 971 aaKnown RBP17.99■□□□□ 0.47
SFXN1-208ENST00000507823 SETDB1Q15047 1291 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 ANO4Q32M45 955 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 RNF19BQ6ZMZ0 732 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 PTCD2Q8WV60 388 aaKnown RBP17.99■□□□□ 0.47
SFXN1-208ENST00000507823 B3GALT6Q96L58 329 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 LRRC37BQ96QE4 947 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 TBL1YQ9BQ87 522 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 ZYG11BQ9C0D3 744 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 KCNK13Q9HB14 408 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 MPP6Q9NZW5 540 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 HCSTQ9UBK5 93 aa17.99■□□□□ 0.47
SFXN1-208ENST00000507823 MICAL3Q7RTP6 2002 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 ATP5HO75947 161 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 DLDP09622 509 aaKnown RBP17.98■□□□□ 0.47
SFXN1-208ENST00000507823 OCRLQ01968 901 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 TAF10Q12962 218 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 RASIP1Q5U651 963 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 ATG16L1Q676U5 607 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 NLRP9Q7RTR0 991 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 RNF168Q8IYW5 571 aaPredicted RBP17.98■□□□□ 0.47
SFXN1-208ENST00000507823 TTPALQ9BTX7 342 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 NPHS2Q9NP85 383 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 IPO11Q9UI26 975 aaKnown RBP17.98■□□□□ 0.47
SFXN1-208ENST00000507823 UNC5CO95185 931 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 HLA-DQB2P05538 268 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 CPB1P15086 417 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 SPRP35270 261 aaPredicted RBP17.98■□□□□ 0.47
SFXN1-208ENST00000507823 RPL10AP62906 217 aaKnown RBP17.98■□□□□ 0.47
SFXN1-208ENST00000507823 HNRNPDQ14103 355 aaKnown RBP17.98■□□□□ 0.47
SFXN1-208ENST00000507823 ANKRD33Q7Z3H0 272 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 LRRC43Q8N309 656 aa17.98■□□□□ 0.47
SFXN1-208ENST00000507823 RFWD2Q8NHY2 731 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms