RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 CXorf65A6NEN9 183 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 GAGE10A6NGK3 116 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 C2CD4BA6NLJ0 364 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 C17orf100A8MU93 164 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 SPTLC2O15270 562 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 LATS1O95835 1130 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 TBX18O95935 607 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 CHRM4P08173 479 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 CERS1P27544 350 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 SKIV2L2P42285 1042 aaKnown RBP4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 CYP2J2P51589 502 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 FOXF2Q12947 444 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 PGM5Q15124 567 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 SLC18A3Q16572 532 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 C5orf22Q49AR2 442 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 KIAA1755Q5JYT7 1200 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 UBAP2Q5T6F2 1119 aaKnown RBP4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 FAM69AQ5T7M9 428 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 TMEM268Q5VZI3 342 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 FAM180BQ6P0A1 224 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 LRIG3Q6UXM1 1119 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 DSTYKQ6XUX3 929 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 CYB5R4Q7L1T6 521 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 UBE2Q1Q7Z7E8 422 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 GALNT16Q8N428 558 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 TMEM217Q8N7C4 229 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 RAB40AQ8WXH6 277 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 HSPH1Q92598 858 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 FAM118BQ9BPY3 351 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 LMAN2LQ9H0V9 348 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 EPHX3Q9H6B9 360 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 HCN3Q9P1Z3 774 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 HDAC6Q9UBN7 1215 aa4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 SLC25A10Q9UBX3 287 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P28-201ENST00000507778 OR6C68A6NDL8 312 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 PPP6CO00743 305 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 PER2O15055 1255 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 UGDHO60701 494 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 RTN3O95197 1032 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 CBX6O95503 412 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 CPA2P48052 419 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 HMGA2P52926 109 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 GHRHRQ02643 423 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 SLC9C1Q4G0N8 1177 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 CEP78Q5JTW2 689 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 FAM171A1Q5VUB5 890 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 TMED8Q6PL24 325 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 ZNF66Q6ZN08 573 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 C1orf122Q6ZSJ8 110 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 R3HCC1LQ7Z5L2 792 aaKnown RBP4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 NEK8Q86SG6 692 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 GHDCQ8N2G8 530 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 SETD9Q8NE22 299 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 UCMAQ8WVF2 138 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 DPF1Q92782 380 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 ZG16BQ96DA0 208 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 C7orf26Q96N11 449 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 IFT27Q9BW83 186 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 SCNM1Q9BWG6 230 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 FRMD8Q9BZ67 464 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 PDCL3Q9H2J4 239 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 PDGFCQ9NRA1 345 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 OLA1Q9NTK5 396 aaKnown RBP4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 KLHL13Q9P2N7 655 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 AASSQ9UDR5 926 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 ICKQ9UPZ9 632 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 CNPY2Q9Y2B0 182 aa4.39□□□□□ -1.71
HMGB1P28-201ENST00000507778 A0A1W2PPH5 198 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 BAIAP3O94812 1187 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 F9P00740 461 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 URODP06132 367 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 LCKP06239 509 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 CD72P21854 359 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 KLRC2P26717 231 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 MPGP29372 298 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 CIITAP33076 1130 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 MAN1A1P33908 653 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 RXRGP48443 463 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 CFHR1Q03591 330 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 PRICKLE4Q2TBC4 344 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 FBXO43Q4G163 708 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 HYIQ5T013 277 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 WDR78Q5VTH9 848 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 TTLL5Q6EMB2 1281 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 ISM2Q6H9L7 571 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 FAM57BQ71RH2 274 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 H1FNTQ75WM6 255 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 TBC1D1Q86TI0 1168 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 IGFN1Q86VF2 1251 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 MON1AQ86VX9 555 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 CHD1LQ86WJ1 897 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 PRIMA1Q86XR5 153 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 DNAAF1Q8NEP3 725 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 TDRD7Q8NHU6 1098 aaKnown RBP4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 NFKBIDQ8NI38 313 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 KAT2AQ92830 837 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 KIF1BPQ96EK5 621 aa4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 TEFMQ96QE5 360 aaKnown RBP4.38□□□□□ -1.71
HMGB1P28-201ENST00000507778 FRG2BQ96QU4 278 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 265.6 ms