RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TTC3P53804 2025 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 VWA8A3KMH1 1905 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 HNRNPCL1O60812 293 aaKnown RBP17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 ITGA2BP08514 1039 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 DNAJB1P25685 340 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 MAPKAPK2P49137 400 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 PCID2Q5JVF3 399 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 MROH9Q5TGP6 573 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 PIK3R6Q5UE93 754 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 C1orf53Q5VUE5 145 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 SLC8B1Q6J4K2 584 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 CNTD1Q8N815 330 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 NETO2Q8NC67 525 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 C7orf26Q96N11 449 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 HIPK3Q9H422 1215 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 TXLNGQ9NUQ3 528 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 SIRPGQ9P1W8 387 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 MTRRQ9UBK8 725 aa17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 ZNF638Q14966 1978 aaKnown RBP17.61■□□□□ 0.41
TRAPPC11-204ENST00000505676 HMX2A2RU54 273 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 DRGXA6NNA5 263 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 RFC2P35250 354 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 SERPINB8P50452 374 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 YBEYP58557 167 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 UGP2Q16851 508 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 USP41Q3LFD5 358 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 PARP15Q460N3 678 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 MS4A13Q5J8X5 152 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 STKLD1Q8NE28 680 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 C10orf82Q8WW14 230 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 PGLYRP2Q96PD5 576 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 LRRC37BQ96QE4 947 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 RBBP8Q99708 897 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 SIKE1Q9BRV8 207 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 PRKD2Q9BZL6 878 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 IPO11Q9UI26 975 aaKnown RBP17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 ZCWPW2A0A1B0GU75 182 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 F5H423 210 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 UGT1A9O60656 530 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 MOCS2O96007 188 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 PAMP19021 973 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 MAGEA12P43365 314 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 ALDH7A1P49419 539 aaKnown RBP17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 GPR15P49685 360 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 LIMK2P53671 638 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 USP46P62068 366 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 CRADDP78560 199 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 PDE1BQ01064 536 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 EFEMP1Q12805 493 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 TAF10Q12962 218 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 BMPR2Q13873 1038 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 SNX30Q5VWJ9 437 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 KLHDC10Q6PID8 442 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 SEPT5Q99719 369 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 TUBB6Q9BUF5 446 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 SLC25A51Q9H1U9 297 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 UGT1A7Q9HAW7 530 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 UGT1A10Q9HAW8 530 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 UGT1A8Q9HAW9 530 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 SLCO1B3Q9NPD5 702 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 PCMTD2Q9NV79 361 aa17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 MTO1Q9Y2Z2 717 aaKnown RBP17.6■□□□□ 0.41
TRAPPC11-204ENST00000505676 EFEMP2O95967 443 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 MPOP05164 745 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 PGFP49763 221 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 PAPOLAP51003 745 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 C10orf120Q5SQS8 335 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 PPHLN1Q8NEY8 458 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 RBM22Q9NW64 420 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 MID2Q9UJV3 735 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 PQBP1O60828 265 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 UBOX5O94941 541 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 CCDC153Q494R4 210 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 RTP2Q5QGT7 225 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 SDHAF4Q5VUM1 108 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 RNF19BQ6ZMZ0 732 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 KCNMB4Q86W47 210 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 SH3TC2Q8TF17 1288 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 SPOCK2Q92563 424 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 E2F7Q96AV8 911 aa17.59■□□□□ 0.41
TRAPPC11-204ENST00000505676 SLC38A8A6NNN8 435 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 BPGMP07738 259 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 ARPP19P56211 112 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 TEDDM1Q5T9Z0 273 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 PKN3Q6P5Z2 889 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 CNKSR3Q6P9H4 555 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 C14orf80Q86SX3 495 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 NUDCD3Q8IVD9 361 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 RNF168Q8IYW5 571 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 FBXO22Q8NEZ5 403 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 TRIM56Q9BRZ2 755 aaKnown RBP17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 SLC13A1Q9BZW2 595 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 ARNT2Q9HBZ2 717 aa17.58■□□□□ 0.4
TRAPPC11-204ENST00000505676 ALDOAP04075 364 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 ADRA1AP35348 466 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 RASSF2P50749 326 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 IKBKEQ14164 716 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 C5orf22Q49AR2 442 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 TPGS2Q68CL5 300 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms