RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 NADSYN1Q6IA69 706 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 PMF1Q6P1K2 205 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 TMEM270Q6UE05 265 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 HORMAD1Q86X24 394 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 CHSY1Q86X52 802 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 APCDD1Q8J025 514 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 LGI2Q8N0V4 545 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 CFAP52Q8N1V2 620 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 TMEM145Q8NBT3 493 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 TMIEQ8NEW7 156 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 WDR36Q8NI36 951 aaKnown RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 SEMA4DQ92854 862 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 FAM149B1Q96BN6 582 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 FEM1CQ96JP0 617 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 FCRL2Q96LA5 508 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 ARHGAP9Q9BRR9 750 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 OSBPL2Q9H1P3 480 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 METTL14Q9HCE5 456 aaKnown RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 SEPT3Q9UH03 358 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 IL17BQ9UHF5 180 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 PCDHB1Q9Y5F3 818 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 COL6A6A6NMZ7 2263 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 MUC22E2RYF6 1773 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 A6NNZ2 444 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 SLC16A3O15427 465 aaKnown RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 SLC31A1O15431 190 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 RTN2O75298 545 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 PCDH8O95206 1070 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 MOCS2O96007 188 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 ZSCAN22P10073 491 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 TACR2P21452 398 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 CCR1P32246 355 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 CTSOP43234 321 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 SYKP43405 635 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 RECQLP46063 649 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 PPP2CBP62714 309 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 YWHAZP63104 245 aaKnown RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 PPP2CAP67775 309 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 CNTN1Q12860 1018 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 PTK2BQ14289 1009 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 AGBL4Q5VU57 503 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 RBM44Q6ZP01 1051 aaKnown RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 GRAMD1CQ8IYS0 662 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 CCAR2Q8N163 923 aaKnown RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 ZSCAN1Q8NBB4 408 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 IFI44Q8TCB0 444 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 DQX1Q8TE96 717 aaKnown RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 FRS2Q8WU20 508 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 NAT6Q93015 286 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 CCNL2Q96S94 520 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 IL12RB2Q99665 862 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 CALN1Q9BXU9 219 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 MIS12Q9H081 205 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
NEDD9-210ENST00000505589 THAP9Q9H5L6 903 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 POPDC2Q9HBU9 364 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 ASCL3Q9NQ33 180 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 ST7Q9NRC1 585 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 RMND1Q9NWS8 449 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 DNAJC28Q9NX36 388 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 PCDHB4Q9Y5E5 795 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 PLXNA2O75051 1894 aa10.18□□□□□ -0.78
NEDD9-210ENST00000505589 A0A1W2PQU0 124 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 EME2A4GXA9 379 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 M0QYV0 167 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 PMM2O15305 246 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 P4HA2O15460 535 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 FFAR2O15552 330 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 MED7O43513 233 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 CLDN11O75508 207 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 CSF2P04141 144 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 ITGB2P05107 769 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 PDGFRAP16234 1089 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 RABIFP47224 123 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 RGS7P49802 495 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 CLCN6P51797 869 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 RPS21P63220 83 aaKnown RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 CDK17Q00537 523 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 SLC20A2Q08357 652 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 SGCGQ13326 291 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 MEA1Q16626 185 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 DCAF17Q5H9S7 520 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 C3orf38Q5JPI3 329 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 RAP1GAP2Q684P5 730 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 KIAA1161Q6NSJ0 714 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 ESRP1Q6NXG1 681 aaKnown RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 ATG14Q6ZNE5 492 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 MMS22LQ6ZRQ5 1243 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 PRICKLE2Q7Z3G6 844 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 SCG3Q8WXD2 468 aaKnown RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 EEF2KMTQ96G04 330 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 PRICKLE1Q96MT3 831 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 NT5C1BQ96P26 610 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 FEM1AQ9BSK4 669 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 C2orf49Q9BVC5 232 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 SEPT10Q9P0V9 454 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 ARMCX3Q9UH62 379 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-210ENST00000505589 SATB2Q9UPW6 733 aa10.17□□□□□ -0.78
NEDD9-210ENST00000505589 MAPK8IP1Q9UQF2 711 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms