RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SLC25A41Q8N5S1 370 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 KAT2AQ92830 837 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 PHKBQ93100 1093 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 SNX27Q96L92 541 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 NODALQ96S42 347 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC94Q9BW85 323 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 PCDHAC1Q9H158 963 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 TMX4Q9H1E5 349 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 RANBP17Q9H2T7 1088 aaKnown RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 SFXN1Q9H9B4 322 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 RNF146Q9NTX7 359 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 IGSF9Q9P2J2 1179 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 FBXO9Q9UK97 447 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 PNMA2Q9UL42 364 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZMYND8Q9ULU4 1186 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 PCDHGB6Q9Y5F9 930 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 SCINQ9Y6U3 715 aa2.26□□□□□ -2.05
HMGB3P17-201ENST00000504195 KIF16BQ96L93 1317 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 CXorf65A6NEN9 183 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 RHPN2P1A8MT19 583 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 VSTM5A8MXK1 200 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 MS4A18H0YCH9 400 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 BMPR1BO00238 502 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 VWA5AO00534 786 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 PEX14O75381 377 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 ALDOAP04075 364 aaKnown RBP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 LCATP04180 440 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 SNRNP70P08621 437 aaKnown RBP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC172P0C7W6 258 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 SETSIPP0DME0 302 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 FGFR2P21802 821 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 SLC16A2P36021 539 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 STAT1P42224 750 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 GLIPR1P48060 266 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 RHBDL3P58872 404 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 ABATP80404 500 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 NSUN2Q08J23 767 aaKnown RBP eCLIP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 NEXNQ0ZGT2 675 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 CSHL1Q14406 222 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 KIF19Q2TAC6 998 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 ARHGAP15Q53QZ3 475 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 FSCBQ5H9T9 825 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 ENTPD8Q5MY95 495 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 DCAF12L2Q5VW00 463 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 RAP1GAP2Q684P5 730 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 ERAP2Q6P179 960 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC174Q6PII3 467 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 KIAA0408Q6ZU52 694 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 OTUD6AQ7L8S5 288 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 IGFN1Q86VF2 1251 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 FAM217AQ8IXS0 508 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 ADGRF3Q8IZF5 1079 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 FAM185AQ8N0U4 392 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 MIGA1Q8NAN2 632 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 NPIPB3Q92617 1050 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 CFAP53Q96M91 514 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 MYCBPQ99417 103 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 POLR3CQ9BUI4 534 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 APOL5Q9BWW9 433 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 MAGEH1Q9H213 219 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 PNNQ9H307 717 aaKnown RBP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 DDX31Q9H8H2 851 aaKnown RBP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 PNRC2Q9NPJ4 139 aaKnown RBP2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 EID1Q9Y6B2 187 aa2.25□□□□□ -2.05
HMGB3P17-201ENST00000504195 GXYLT2A0PJZ3 443 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 SAC3D1A6NKF1 404 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 C3orf70A6NLC5 250 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 MPHOSPH10O00566 681 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TSPAN6O43657 245 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 BUB3O43684 328 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 LIASO43766 372 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 KIF5CO60282 957 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 WDHD1O75717 1129 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 NEURL1O76050 574 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 KAT7O95251 611 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZBTB11O95625 1053 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 ALDOCP09972 364 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC159P0C7I6 412 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZNF853P0CG23 659 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 PECAM1P16284 738 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 EGR1P18146 543 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 PAX3P23760 479 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 CHRNA5P30532 468 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 CLCN5P51795 746 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 CRIP2P52943 208 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 SELENOVP59797 346 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 SARNPP82979 210 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 SHC2P98077 582 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZNF543Q08ER8 600 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TRAF1Q13077 416 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TMED1Q13445 227 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 FCN2Q15485 313 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TAF7Q15545 349 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 SLC1A5Q15758 541 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 HLFQ16534 295 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 MAPKAPK3Q16644 382 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 GFOD2Q3B7J2 385 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms