RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 RRN3Q9NYV6 651 aa13.66□□□□□ -0.22
PHGDH-207ENST00000496756 SMARCAL1Q9NZC9 954 aa13.66□□□□□ -0.22
PHGDH-207ENST00000496756 DKK4Q9UBT3 224 aa13.66□□□□□ -0.22
PHGDH-207ENST00000496756 PCYOX1Q9UHG3 505 aa13.66□□□□□ -0.22
PHGDH-207ENST00000496756 URB1O60287 2271 aaKnown RBP13.65□□□□□ -0.22
PHGDH-207ENST00000496756 FAM170AA1A519 330 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 TBC1D3BA6NDS4 549 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 F8VP50 259 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 KRT1P04264 644 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 GABRG2P18507 467 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 MARCKSL1P49006 195 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 DRG2P55039 364 aaKnown RBP13.65□□□□□ -0.22
PHGDH-207ENST00000496756 KDSRQ06136 332 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 MESP2Q0VG99 397 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 MDH1BQ5I0G3 518 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 BTBD8Q5XKL5 378 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 FAM171BQ6P995 826 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 SIX6OS1Q8N1H7 587 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 SCML4Q8N228 414 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 ZNF513Q8N8E2 541 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-207ENST00000496756 PNPLA1Q8N8W4 532 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 TTC13Q8NBP0 860 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 MDM1Q8TC05 714 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 CCHCR1Q8TD31 782 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 TEKT4Q8WW24 435 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 IRGQQ8WZA9 623 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 SLCO2A1Q92959 643 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 MAGOHBQ96A72 148 aaKnown RBP13.65□□□□□ -0.22
PHGDH-207ENST00000496756 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 HSPA12BQ96MM6 686 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 OSBPL8Q9BZF1 889 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 CNGB3Q9NQW8 809 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 CALCOCO1Q9P1Z2 691 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 KIAA1522Q9P206 1035 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-207ENST00000496756 RAXQ9Y2V3 346 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 CPQQ9Y646 472 aa13.65□□□□□ -0.22
PHGDH-207ENST00000496756 PLXNB3Q9ULL4 1909 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 ASXL3Q9C0F0 2248 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 IGHV1OR15-9A0A0B4J2B8 117 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 ZNF840PA6NDX5 716 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 ZNF487B1APH4 448 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 PAPSS1O43252 624 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-207ENST00000496756 RAD51CO43502 376 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 PRPSAP2O60256 369 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 NDUFS2O75306 463 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 LRCH4O75427 683 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 OLFM2O95897 454 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 GAS8O95995 478 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 HOXB2P14652 356 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 NTSR1P30989 418 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 GRIK1P39086 918 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 RGS7P49802 495 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 TAS2R40P59535 323 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 GAD2Q05329 585 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 PDK2Q15119 407 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 CCNG2Q16589 344 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 TFDP3Q5H9I0 405 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 STRADAQ7RTN6 431 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 FAM35AQ86V20 835 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 PIGZQ86VD9 579 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 C12orf40Q86WS4 652 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 PSTKQ8IV42 348 aaKnown RBP13.64□□□□□ -0.23
PHGDH-207ENST00000496756 SLC41A1Q8IVJ1 513 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 RGL4Q8IZJ4 473 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 JOSD2Q8TAC2 188 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 RXFP2Q8WXD0 754 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 FOXJ1Q92949 421 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 BBC3Q96PG8 261 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-207ENST00000496756 TTLL2Q9BWV7 592 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 RNF38Q9H0F5 515 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 VIPAS39Q9H9C1 493 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 CSNK1G1Q9HCP0 422 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 ZDHHC4Q9NPG8 344 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 SMPD4Q9NXE4 827 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 CFAP97Q9P2B7 532 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 DEC1Q9P2X7 70 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 STAP1Q9ULZ2 295 aa13.64□□□□□ -0.23
PHGDH-207ENST00000496756 MYOFQ9NZM1 2061 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 E2F8A0AVK6 867 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 TRIM66O15016 1216 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 DAB1O75553 588 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 AP1G2O75843 785 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 ECEL1O95672 775 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 OGDHQ02218 1023 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 GUCY2DQ02846 1103 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 SLC25A11Q02978 314 aaKnown RBP13.63□□□□□ -0.23
PHGDH-207ENST00000496756 C19orf57Q0VDD7 668 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 WDR45BQ5MNZ6 344 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 LY6G5CQ5SRR4 150 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 BEND6Q5SZJ8 279 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-207ENST00000496756 SDE2Q6IQ49 451 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 DRICH1Q6PGQ1 229 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-207ENST00000496756 CCDC137Q6PK04 289 aaKnown RBP13.63□□□□□ -0.23
PHGDH-207ENST00000496756 CLEC20AQ6ZU45 233 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 BEND5Q7L4P6 421 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 SCUBE3Q8IX30 993 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 PHTF2Q8N3S3 785 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 PRELID2Q8N945 189 aa13.63□□□□□ -0.23
PHGDH-207ENST00000496756 SEC14L1Q92503 715 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms