RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 E9PAM4 449 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 FCHO1O14526 889 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 MATN3O15232 486 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 TIMM44O43615 452 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 MAFKO60675 156 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 ANXA9O76027 345 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 MOCS2O96007 188 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 FGF3P11487 239 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 HSP90AA5PQ58FG0 334 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 TIGD7Q6NT04 549 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 MSANTD2Q6P1R3 559 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 CMC1Q7Z7K0 106 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 CEP57Q86XR8 500 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 NUP93Q8N1F7 819 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 RTL3Q8N8U3 475 aaKnown RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 AGAP11Q8TF27 550 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 PRR11Q96HE9 360 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 FAM193BQ96PV7 902 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 FCRL5Q96RD9 977 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 AGAP2Q99490 1192 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 TBL1YQ9BQ87 522 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 SIKE1Q9BRV8 207 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 SLC39A8Q9C0K1 460 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 FBXO44Q9H4M3 255 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 TLE6Q9H808 572 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 ZNF395Q9H8N7 513 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 GLOD4Q9HC38 313 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 CHRAC1Q9NRG0 131 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 C20orf96Q9NUD7 363 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 ARL8BQ9NVJ2 186 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 SRRDQ9UH36 339 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 HS3ST4Q9Y661 456 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 SYN3O14994 580 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 CCDC22O60826 627 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 PRKCGP05129 697 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 ATP5BP06576 529 aaKnown RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 TPH1P17752 444 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 CALB2P22676 271 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 CCND1P24385 295 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 TUBP50607 506 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 AQP5P55064 265 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 FAM189BP81408 668 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 MPP3Q13368 585 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 CCDC153Q494R4 210 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 PPM1JQ5JR12 505 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 ARTNQ5T4W7 220 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 AFMIDQ63HM1 303 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 PDPK2PQ6A1A2 396 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 FSTL4Q6MZW2 842 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 ALYREFQ86V81 257 aaKnown RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 MON1AQ86VX9 555 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 LONP2Q86WA8 852 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 ARHGAP18Q8N392 663 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 ATXN7L3BQ96GX2 97 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 NSL1Q96IY1 281 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 KIFC1Q9BW19 673 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 C20orf27Q9GZN8 174 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 OSER1Q9NX31 292 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 NSMCE4AQ9NXX6 385 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 TMEM216Q9P0N5 145 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 DNAJB4Q9UDY4 337 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 MARCOQ9UEW3 520 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-220ENST00000496711 NUDT5Q9UKK9 219 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 TLR6Q9Y2C9 796 aa13.29□□□□□ -0.28
GARNL3-220ENST00000496711 SERPINE1P05121 402 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 MPOP05164 745 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 KITP10721 976 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 EZRP15311 586 aaKnown RBP13.28□□□□□ -0.28
GARNL3-220ENST00000496711 KCNA4P22459 653 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 NMBRP28336 390 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 GPR15P49685 360 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 GEMP55040 296 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 E2F5Q15329 346 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 PREPLQ4J6C6 727 aaPredicted RBP13.28□□□□□ -0.28
GARNL3-220ENST00000496711 VARS2Q5ST30 1063 aaKnown RBP13.28□□□□□ -0.28
GARNL3-220ENST00000496711 WLSQ5T9L3 541 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 SDHAF4Q5VUM1 108 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 TTC7BQ86TV6 843 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
GARNL3-220ENST00000496711 IPMKQ8NFU5 416 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 SPATA22Q8NHS9 363 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 ZNF419Q96HQ0 510 aaPredicted RBP13.28□□□□□ -0.28
GARNL3-220ENST00000496711 TSEN34Q9BSV6 310 aaKnown RBP13.28□□□□□ -0.28
GARNL3-220ENST00000496711 FTHL17Q9BXU8 183 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 NMUR2Q9GZQ4 415 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 IARS2Q9NSE4 1012 aaKnown RBP13.28□□□□□ -0.28
GARNL3-220ENST00000496711 NDFIP2Q9NV92 336 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 FNIP2Q9P278 1114 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 COPG2Q9UBF2 871 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
GARNL3-220ENST00000496711 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.28
GARNL3-220ENST00000496711 A0A1W2PQY0 241 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 WASH4PA8MWX3 477 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 TADA2AO75478 443 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 MT-CYBP00156 380 aaPredicted RBP13.27□□□□□ -0.28
GARNL3-220ENST00000496711 HLA-DQB2P05538 268 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 SLC2A3P11169 496 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms