RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 PGAM1P18669 254 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 FPGSQ05932 587 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 TAF12Q16514 161 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 CYS1Q717R9 158 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 SLC26A11Q86WA9 606 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 LRRC6Q86X45 466 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 CTAGE3PQ8IX95 158 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 LGI2Q8N0V4 545 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 CFAP52Q8N1V2 620 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 ZNF317Q96PQ6 595 aaPredicted RBP13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 KLF16Q9BXK1 252 aaPredicted RBP13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 SENP1Q9P0U3 644 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 INSL6Q9Y581 213 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 LCHNA4D1U4 455 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 F11P03951 625 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 INHBAP08476 426 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 KRT4P19013 534 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 IFNAR2P48551 515 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 HARS2P49590 506 aaKnown RBP13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 EPHB3P54753 998 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 MTA1Q13330 715 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 CRYMQ14894 314 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 DENND1CQ8IV53 801 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 DENND1AQ8TEH3 1009 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 FATE1Q969F0 183 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 ZBED2Q9BTP6 218 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 CCDC134Q9H6E4 229 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 LRRC40Q9H9A6 602 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 IL21Q9HBE4 155 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 DONSONQ9NYP3 566 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 MAFFQ9ULX9 164 aa13.95□□□□□ -0.18
SPTBN1-205ENST00000496323 FAM47DPA6NHR8 397 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 F5H5T6 163 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 H3BNC9 293 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 PRPF4O43172 522 aaKnown RBP eCLIP13.94□□□□□ -0.182e-7■□□□□ 8.4
SPTBN1-205ENST00000496323 TYROBPO43914 113 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 RAMP2O60895 175 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 FAM107AO95990 144 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 OR1E1P30953 314 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 ACVRL1P37023 503 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 PRPSAP1Q14558 356 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 CERCAMQ5T4B2 595 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 CES3Q6UWW8 571 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 SH2D5Q6ZV89 423 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 CCNJLQ8IV13 435 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 PLD4Q96BZ4 506 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 ZFRQ96KR1 1074 aaKnown RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 PRICKLE1Q96MT3 831 aaPredicted RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 FCRL3Q96P31 734 aaPredicted RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 KLHL5Q96PQ7 755 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 SMC6Q96SB8 1091 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 ZNF180Q9UJW8 692 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 NDUFAB1O14561 156 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 CORO1AP31146 461 aaKnown RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 PPP3CCP48454 512 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 MAPKAPK2P49137 400 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 SLC11A2P49281 568 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 WDR4P57081 412 aaKnown RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 SLC10A7Q0GE19 358 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 HNRNPDQ14103 355 aaKnown RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 POLD3Q15054 466 aaPredicted RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 LILRA6Q6PI73 481 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 HERC6Q8IVU3 1022 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 DNAAF3Q8N9W5 541 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 SERAC1Q96JX3 654 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 CYP2S1Q96SQ9 504 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 NAT9Q9BTE0 207 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 FAM107BQ9H098 131 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 PRKAG2Q9UGJ0 569 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 AAR2Q9Y312 384 aaKnown RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 IKBKGQ9Y6K9 419 aa13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 ZFP37Q9Y6Q3 630 aaPredicted RBP13.94□□□□□ -0.18
SPTBN1-205ENST00000496323 IQANK1A0A1B0GTG1 560 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 HMX2A2RU54 273 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 CXCL14O95715 111 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 TPH1P17752 444 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 CA8P35219 290 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 RPA3P35244 121 aaPredicted RBP13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 SGSHP51688 502 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 SLC18A1P54219 525 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 RPS24P62847 133 aaKnown RBP13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 CREMQ03060 361 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 NIPAL4Q0D2K0 466 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 SERINC3Q13530 473 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 ANO4Q32M45 955 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 PARP15Q460N3 678 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 DENND5AQ6IQ26 1287 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 TMEM135Q86UB9 458 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 TEX26Q8N6G2 289 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 OR52K2Q8NGK3 314 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 ZNF473Q8WTR7 871 aaKnown RBP13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 AZIN2Q96A70 460 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 TTC17Q96AE7 1141 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 KLF6Q99612 283 aaPredicted RBP13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 SMPD4Q9NXE4 827 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 BFARQ9NZS9 450 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 SLC17A6Q9P2U8 582 aa13.93□□□□□ -0.18
SPTBN1-205ENST00000496323 STK39Q9UEW8 545 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms