RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 CUL9Q8IWT3 2517 aa10.47□□□□□ -0.73
RAB11FIP3-211ENST00000495663 BTNL10A8MVZ5 291 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 SCAMP3O14828 347 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 ACSL4O60488 711 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 GREM1O60565 184 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 MOCS2O96007 188 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 KLKB1P03952 638 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 F13BP05160 661 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 CHKAP35790 457 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 ARHGAP25P42331 645 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 NOP2P46087 812 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 SLC11A2P49281 568 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 ATXN1P54253 815 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 HADHBP55084 474 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 HDAC4P56524 1084 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 ZNF252P-AS1Q0IIN9 211 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 PDGFRLQ15198 375 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 SPRED3Q2MJR0 410 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 ARL13BQ3SXY8 428 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 CDPF1Q6NVV7 123 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 SCYL2Q6P3W7 929 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 FAM131BQ86XD5 332 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 BBS7Q8IWZ6 715 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 NIPA2Q8N8Q9 360 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 ATP2A3Q93084 1043 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 AZIN2Q96A70 460 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 BTN2A3PQ96KV6 586 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 ZNF830Q96NB3 372 aaPredicted RBP10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 TSGA10Q9BZW7 698 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 TKTL2Q9H0I9 626 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 AGO1Q9UL18 857 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 TFR2Q9UP52 801 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 SORCS3Q9UPU3 1222 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 WNT6Q9Y6F9 365 aa10.46□□□□□ -0.73
RAB11FIP3-211ENST00000495663 COL4A2P08572 1712 aa10.46□□□□□ -0.74
RAB11FIP3-211ENST00000495663 MIA3Q5JRA6 1907 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 FAM95CA0A1B0GW59 222 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 A0A1W2PP55 124 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 KCNU1A8MYU2 1149 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 KRT86O43790 486 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 NFATC1O95644 943 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 SRFP11831 508 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 AIF1P55008 147 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 NAP1L1P55209 391 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 PCDH1Q08174 1060 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 MESDQ14696 234 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 IFI16Q16666 785 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 RAB6CQ53S08 254 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 EXOSC6Q5RKV6 272 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 ADGRF1Q5T601 910 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 ACBD5Q5T8D3 534 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 CPXM2Q8N436 756 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 CSGALNACT1Q8TDX6 532 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 ZFYVE19Q96K21 471 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 UHRF1Q96T88 793 aaPredicted RBP10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 DDX50Q9BQ39 737 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 RAB6CQ9H0N0 254 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 LINC00597Q9H2U6 94 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 LIN7BQ9HAP6 207 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 ARHGEF38Q9NXL2 777 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 STOML2Q9UJZ1 356 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 DUSP12Q9UNI6 340 aa10.45□□□□□ -0.74
RAB11FIP3-211ENST00000495663 A0A096LPE4 126 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 A0A1W2PPZ6 126 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 PAX4O43316 350 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 BUB1O43683 1085 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 PRPSAP2O60256 369 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 LRCH4O75427 683 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 PAGE1O75459 146 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 PROSCO94903 275 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 WNT11O96014 354 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 MAN1A1P33908 653 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 PCK1P35558 622 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 GRIA4P48058 902 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 SERPINB4P48594 390 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 PFKPQ01813 784 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 RUNX3Q13761 415 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 TRIM68Q6AZZ1 485 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 SLFN11Q7Z7L1 901 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 CHSY1Q86X52 802 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 FAM217AQ8IXS0 508 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 ADGRG2Q8IZP9 1017 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 CPA6Q8N4T0 437 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 C2CD4AQ8NCU7 369 aaPredicted RBP10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 DNASE1L2Q92874 299 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 NTAN1Q96AB6 310 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 ASIC4Q96FT7 647 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 NECAB3Q96P71 396 aaPredicted RBP10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 HAPLN3Q96S86 360 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 NRSN2Q9GZP1 204 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 EBF3Q9H4W6 596 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 TRPV5Q9NQA5 729 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 SLC2A4RGQ9NR83 387 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 SPHK2Q9NRA0 654 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 USP18Q9UMW8 372 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 PPP2R2CQ9Y2T4 447 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 DUSP10Q9Y6W6 482 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 MYOFQ9NZM1 2061 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 KIAA1549LQ6ZVL6 1849 aa10.44□□□□□ -0.74
RAB11FIP3-211ENST00000495663 COL4A3Q01955 1670 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms