RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	HMCES	Q96FZ2	354 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	FEM1A	Q9BSK4	669 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	CARD6	Q9BX69	1037 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	ACE2	Q9BYF1	805 aa	Predicted RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	RBM12	Q9NTZ6	932 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	PLK2	Q9NYY3	685 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	SLC25A13	Q9UJS0	675 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	DNPEP	Q9ULA0	475 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	SLC8A2	Q9UPR5	921 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	FAM187A	A6NFU0	413 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	SGK1	O00141	431 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	NPC1	O15118	1278 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	PRAMEF11	O60813	436 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	APOD	P05090	189 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	POLR2E	P19388	210 aa	Known RBP	13.84	□□□□□ -0.19
APTX-231	ENST00000494973	NNMT	P40261	264 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	CLCN6	P51797	869 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	TNK2	Q07912	1038 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	SLC10A2	Q12908	348 aa	Predicted RBP	13.84	□□□□□ -0.19
APTX-231	ENST00000494973	HNRNPD	Q14103	355 aa	Known RBP	13.84	□□□□□ -0.19
APTX-231	ENST00000494973	P3H1	Q32P28	736 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	PITRM1	Q5JRX3	1037 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	ITPRIPL1	Q6GPH6	555 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	C8orf74	Q6P047	294 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	MMGT1	Q8N4V1	131 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	ATG4A	Q8WYN0	398 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	LRRC45	Q96CN5	670 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	RTP4	Q96DX8	246 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	PNKP	Q96T60	521 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	SPON2	Q9BUD6	331 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	DDX47	Q9H0S4	455 aa	Known RBP	13.84	□□□□□ -0.19
APTX-231	ENST00000494973	NOL6	Q9H6R4	1146 aa	Known RBP	13.84	□□□□□ -0.19
APTX-231	ENST00000494973	ABCB8	Q9NUT2	735 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	NDFIP2	Q9NV92	336 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	GTSE1	Q9NYZ3	720 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	SMARCAL1	Q9NZC9	954 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	SAE1	Q9UBE0	346 aa	Predicted RBP	13.84	□□□□□ -0.19
APTX-231	ENST00000494973	UBA2	Q9UBT2	640 aa	Predicted RBP	13.84	□□□□□ -0.19
APTX-231	ENST00000494973	TRHDE	Q9UKU6	1024 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	DUSP12	Q9UNI6	340 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	SORCS3	Q9UPU3	1222 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	MFHAS1	Q9Y4C4	1052 aa		13.84	□□□□□ -0.19
APTX-231	ENST00000494973	KIAA1549L	Q6ZVL6	1849 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	CBX4	O00257	560 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	MATN3	O15232	486 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	MAFK	O60675	156 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	OPHN1	O60890	802 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	HLA-F	P30511	346 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	GRIA2	P42262	883 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	VASP	P50552	380 aa	Predicted RBP	13.83	□□□□□ -0.2
APTX-231	ENST00000494973	IFI35	P80217	286 aa	Predicted RBP	13.83	□□□□□ -0.2
APTX-231	ENST00000494973	DR1	Q01658	176 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	C2orf54	Q08AI8	447 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	SNX1	Q13596	522 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	PPP1R7	Q15435	360 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	INO80D	Q53TQ3	878 aa	Predicted RBP	13.83	□□□□□ -0.2
APTX-231	ENST00000494973	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.83	□□□□□ -0.2
APTX-231	ENST00000494973	KLHL7	Q8IXQ5	586 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	ALLC	Q8N6M5	410 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	TERB1	Q8NA31	727 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	KDM1B	Q8NB78	822 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	OR7D4	Q8NG98	312 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	MAML1	Q92585	1016 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	KRT12	Q99456	494 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	RPP25	Q9BUL9	199 aa	Known RBP	13.83	□□□□□ -0.2
APTX-231	ENST00000494973	RAB17	Q9H0T7	212 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	PCDH9	Q9HC56	1237 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.83	□□□□□ -0.2
APTX-231	ENST00000494973	SEPT3	Q9UH03	358 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	OR51B4	Q9Y5P0	310 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	SZT2	Q5T011	3432 aa		13.83	□□□□□ -0.2
APTX-231	ENST00000494973	NUP205	Q92621	2012 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973		A0A0D9SEW6	157 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	GOLGA6C	A6NDK9	693 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	GOLGA6B	A6NDN3	693 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	C19orf67	A6NJJ6	358 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	EFCAB8	A8MWE9	144 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	MAN2B1	O00754	1011 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	KCNN4	O15554	427 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	SRPRA	P08240	638 aa	Known RBP	13.82	□□□□□ -0.2
APTX-231	ENST00000494973	CISD3	P0C7P0	127 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	GOLGA6D	P0CG33	693 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	CTH	P32929	405 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	CD70	P32970	193 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	ACVRL1	P37023	503 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	ST8SIA6	P61647	398 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	ZNF235	Q14590	738 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	FSCB	Q5H9T9	825 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	MARC1	Q5VT66	337 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	UBALD2	Q8IYN6	164 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	WFDC5	Q8TCV5	224 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	KCNV2	Q8TDN2	545 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	TTC17	Q96AE7	1141 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	ALG14	Q96F25	216 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	P2RY11	Q96G91	374 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	LMLN	Q96KR4	655 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	ASB2	Q96Q27	587 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	LGMN	Q99538	433 aa		13.82	□□□□□ -0.2
APTX-231	ENST00000494973	P2RY13	Q9BPV8	354 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms