RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RPS6KB1P23443 525 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 TYK2P29597 1187 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 MMP13P45452 471 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 RPS6KA3P51812 740 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 MVDP53602 400 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 POLGP54098 1239 aaPredicted RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 NR1H2P55055 460 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMC4-224ENST00000494612 GOLGA8FQ08AF8 430 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 TBX2Q13207 712 aaPredicted RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 BYSLQ13895 437 aaKnown RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 IL13RA2Q14627 380 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 FBXO43Q4G163 708 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 INTS11Q5TA45 600 aaKnown RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 NAPEPLDQ6IQ20 393 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 ANO7Q6IWH7 933 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 RETSATQ6NUM9 610 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 DENND1BQ6P3S1 775 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 ZNF474Q6S9Z5 364 aaPredicted RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 RTL10Q7L3V2 364 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 MAATS1Q7Z4T9 603 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 EXD3Q8N9H8 876 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 TEX19Q8NA77 164 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 USP38Q8NB14 1042 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 RUFY2Q8WXA3 655 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 ST8SIA4Q92187 359 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 ZUFSPQ96AP4 578 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 ZBTB10Q96DT7 871 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 PPM1MQ96MI6 270 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 MPHOSPH8Q99549 860 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 PHF7Q9BWX1 381 aaPredicted RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 PAIP1Q9H074 479 aaKnown RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 AAMDCQ9H7C9 122 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 MOV10Q9HCE1 1003 aaKnown RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 SMC4Q9NTJ3 1288 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 ALKBH4Q9NXW9 302 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 TNFSF13BQ9Y275 285 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 SPATA31A5Q5VU36 1347 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 SPATA31A7Q8IWB4 1347 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 SH2D7A6NKC9 451 aaPredicted RBP4.83□□□□□ -1.64
SMC4-224ENST00000494612 BCAR3O75815 825 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 KLRC2P26717 231 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 CIITAP33076 1130 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 HNF1BP35680 557 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 PTPN9P43378 593 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 CPA2P48052 419 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 RPP30P78346 268 aaKnown RBP4.83□□□□□ -1.64
SMC4-224ENST00000494612 STIM1Q13586 685 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 RABEP1Q15276 862 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 TRIP6Q15654 476 aaKnown RBP4.83□□□□□ -1.64
SMC4-224ENST00000494612 C10orf76Q5T2E6 689 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 ZNF813Q6ZN06 617 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 SAMD14Q8IZD0 417 aaPredicted RBP4.83□□□□□ -1.64
SMC4-224ENST00000494612 KAT2AQ92830 837 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 TAOK3Q9H2K8 898 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 SLC32A1Q9H598 525 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 SLC22A11Q9NSA0 550 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 TMEM248Q9NWD8 314 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 IRAK4Q9NWZ3 460 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 WWOXQ9NZC7 414 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 ANAPC4Q9UJX5 808 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 SLC13A4Q9UKG4 626 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 SUFUQ9UMX1 484 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 DTX4Q9Y2E6 619 aa4.83□□□□□ -1.64
SMC4-224ENST00000494612 TARSL2A2RTX5 802 aaKnown RBP4.82□□□□□ -1.64
SMC4-224ENST00000494612 C2CD4BA6NLJ0 364 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 MSI1O43347 362 aaKnown RBP4.82□□□□□ -1.64
SMC4-224ENST00000494612 CD4P01730 458 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 SNHG28P0DPA3 235 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 CYP19A1P11511 503 aaPredicted RBP4.82□□□□□ -1.64
SMC4-224ENST00000494612 FCGR2AP12318 317 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 TNNT1P13805 278 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 ZNF91Q05481 1191 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 GALNT3Q14435 633 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 PGM5Q15124 567 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 GPR68Q15743 365 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 FAM69AQ5T7M9 428 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 B4GALNT4Q76KP1 1039 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 ADGRG6Q86SQ4 1221 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 KLBQ86Z14 1044 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 RNF125Q96EQ8 232 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 APOPT1Q96IL0 206 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMC4-224ENST00000494612 CADM1Q9BY67 442 aaKnown RBP4.82□□□□□ -1.64
SMC4-224ENST00000494612 ZNF304Q9HCX3 659 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 TXNRD2Q9NNW7 524 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 HDAC6Q9UBN7 1215 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 UPB1Q9UBR1 384 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 PGAP2Q9UHJ9 254 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 CNOT7Q9UIV1 285 aaKnown RBP4.82□□□□□ -1.64
SMC4-224ENST00000494612 UTS2RQ9UKP6 389 aa4.82□□□□□ -1.64
SMC4-224ENST00000494612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.81□□□□□ -1.64
SMC4-224ENST00000494612 C17orf100A8MU93 164 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 E5RJQ4 531 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 ADAM10O14672 748 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 CCNT1O60563 726 aaKnown RBP4.81□□□□□ -1.64
SMC4-224ENST00000494612 MBD4O95243 580 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 METTL18O95568 372 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 CD63P08962 238 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 ELF1P32519 619 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms