RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 PPARGC1AQ9UBK2 798 aaKnown RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 CNOT8Q9UFF9 292 aaKnown RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 SMG5Q9UPR3 1016 aaKnown RBP9.02□□□□□ -0.97
ITGB1-217ENST00000494395 RAD54BQ9Y620 910 aa9.02□□□□□ -0.97
ITGB1-217ENST00000494395 A6NJY4 79 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 GFRA3O60609 400 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 ASLP04424 464 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 CYP1A2P05177 515 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 POLR2EP19388 210 aaKnown RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 EIF4A3P38919 411 aaKnown RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 P2RY2P41231 377 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 CTSOP43234 321 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF75DP51815 510 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 PRR20EP86478 221 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 PRR20CP86479 221 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 PRR20DP86480 221 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 PRR20BP86481 221 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 PRR20AP86496 221 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 CAMK2GQ13555 558 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 E2F5Q15329 346 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 SLC18A3Q16572 532 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 RALGAPA1Q6GYQ0 2036 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 DCUN1D2Q6PH85 259 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 ALYREFQ86V81 257 aaKnown RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 PYROXD2Q8N2H3 581 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 KDM1BQ8NB78 822 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 HMGB4Q8WW32 186 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 ARHGEF26Q96DR7 871 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 TRIM11Q96F44 468 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 MRFAP1L1Q96HT8 127 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 ZC3H10Q96K80 434 aaKnown RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 MRGPRX1Q96LB2 322 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 PEBP4Q96S96 227 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 CHP1Q99653 195 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 TRIM5Q9C035 493 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 MKRN2Q9H000 416 aaKnown RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 THAP2Q9H0W7 228 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 DUSP15Q9H1R2 295 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 SLC6A17Q9H1V8 727 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 MPP6Q9NZW5 540 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 KIAA1522Q9P206 1035 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-217ENST00000494395 OR12D3Q9UGF7 316 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 FZD10Q9ULW2 581 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 SCINQ9Y6U3 715 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 PIEZO1Q92508 2521 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 FAM186AA6NE01 2351 aa9.01□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 ANKRD62A6NC57 917 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 DCLK1O15075 740 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 LRCH4O75427 683 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 RPP40O75818 363 aaKnown RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 ALDH1A2O94788 518 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 LRIG2O94898 1065 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 ATP5BP06576 529 aaKnown RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 EPHX1P07099 455 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 SRPRAP08240 638 aaKnown RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 HLA-EP13747 358 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 BCKDHBP21953 392 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 PSMA2P25787 234 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 PTGIRP43119 386 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 GALCP54803 685 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 AIF1P55008 147 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 OXCT1P55809 520 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF177Q13360 481 aaPredicted RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 SIM2Q14190 667 aaPredicted RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 ARL13BQ3SXY8 428 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 PLK5Q496M5 336 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 FNDC3BQ53EP0 1204 aaKnown RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 LAIR1Q6GTX8 287 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 SERPINA13PQ6UXR4 307 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 SLFN11Q7Z7L1 901 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 SETD3Q86TU7 594 aaPredicted RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 KBTBD6Q86V97 674 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 VPS36Q86VN1 386 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 CNGA4Q8IV77 575 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF366Q8N895 744 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 NIPA2Q8N8Q9 360 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 FRS2Q8WU20 508 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 FEM1AQ9BSK4 669 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9□□□□□ -0.97
ITGB1-217ENST00000494395 RETREG1Q9H6L5 497 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 CD93Q9NPY3 652 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 PRSS16Q9NQE7 514 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 NDFIP2Q9NV92 336 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 TMEM248Q9NWD8 314 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 USP36Q9P275 1121 aaKnown RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 SEPT3Q9UH03 358 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 MBD1Q9UIS9 605 aaPredicted RBP9□□□□□ -0.97
ITGB1-217ENST00000494395 ERVW-1Q9UQF0 538 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 FRYLO94915 3013 aa9□□□□□ -0.97
ITGB1-217ENST00000494395 NUMA1Q14980 2115 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 IGHV1OR15-9A0A0B4J2B8 117 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 A0A0D9SEW6 157 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 ILVBLA1L0T0 632 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 WASH4PA8MWX3 477 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 AKR1B15C9JRZ8 316 aaPredicted RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 SRGAP2O75044 1071 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms