RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 AFG1LQ8WV93 481 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 HDAC2Q92769 488 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 COQ8BQ96D53 544 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ZBTB10Q96DT7 871 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF333Q96JL9 665 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 NPAS1Q99742 590 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SCNM1Q9BWG6 230 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SF3B5Q9BWJ5 86 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 TM2D2Q9BX73 214 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SLC26A6Q9BXS9 759 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 FOXP1Q9H334 677 aaPredicted RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 JMJD4Q9H9V9 463 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 NOD2Q9HC29 1040 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 PDE11AQ9HCR9 933 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 HIF1ANQ9NWT6 349 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 MTMR4Q9NYA4 1195 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 DHDHQ9UQ10 334 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 RABGAP1Q9Y3P9 1069 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SQORQ9Y6N5 450 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 KIR2DS5A0A0G2JLQ3 304 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 IGLV5-39A0A0G2JS06 123 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 SLC22A23A1A5C7 686 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 FAM90A20PA6NIJ5 464 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 PRSS47A8MTI9 375 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 K7ENM7 598 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 KIR2DS3K7RE56 304 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 UGDHO60701 494 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 TOP3BO95985 862 aaKnown RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 CD4P01730 458 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 KLKB1P03952 638 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 CKMT1AP12532 417 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 HOXB9P17482 250 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 XBP1P17861 261 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 RXRAP19793 462 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 HOXA7P31268 230 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 CYP2J2P51589 502 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 SHC2P98077 582 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 GAD2Q05329 585 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 PRKG2Q13237 762 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 KLF9Q13886 244 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 DCTN1Q14203 1278 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 ANKRD1Q15327 319 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 INPP5JQ15735 1006 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 GXYLT1Q4G148 440 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 EARS2Q5JPH6 523 aaKnown RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 FAM171A1Q5VUB5 890 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 SPATA1Q5VX52 437 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF425Q6IV72 752 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 AADACL2Q6P093 401 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 FAM180BQ6P0A1 224 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF474Q6S9Z5 364 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 HERC6Q8IVU3 1022 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 SUGP1Q8IWZ8 645 aaKnown RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 DDIASQ8IXT1 998 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 TMEM57Q8N5G2 664 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 ESX1Q8N693 406 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 PDILTQ8N807 584 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 TSPYL6Q8N831 410 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 PTGR2Q8N8N7 351 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 USP38Q8NB14 1042 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 ARRDC3Q96B67 414 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 SERINC2Q96SA4 455 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 TREX2Q9BQ50 279 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 WDR83Q9BRX9 315 aaKnown RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 GATA5Q9BWX5 397 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 TRIM31Q9BZY9 425 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 TWSG1Q9GZX9 223 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 ABHD16BQ9H3Z7 469 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 ACTR5Q9H9F9 607 aaPredicted RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 CHODLQ9H9P2 273 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 MOV10Q9HCE1 1003 aaKnown RBP2.6□□□□□ -1.99
LMNB1-207ENST00000494185 RIC8AQ9NPQ8 531 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 TBC1D22BQ9NU19 505 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 POLG2Q9UHN1 485 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 FEM1BQ9UK73 627 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 DERAQ9Y315 318 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 AFG3L2Q9Y4W6 797 aa2.6□□□□□ -1.99
LMNB1-207ENST00000494185 LMTK3Q96Q04 1460 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 B4DGG1 531 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 B9A039 149 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 GRM8O00222 908 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 IKBKBO14920 756 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 TP73O15350 636 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 INSIG1O15503 277 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 ANP32CO43423 234 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF500O60304 480 aaPredicted RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 TSPAN3O60637 253 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CYP21A2P08686 494 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 MYZAPP0CAP1 466 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 T-ENOLP0DO92 83 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 SNHG28P0DPA3 235 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CHN1P15882 459 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 LIFRP42702 1097 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 PGGT1BP53609 377 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 ADPRHP54922 357 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 SETQ01105 290 aaPredicted RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CDK18Q07002 472 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 PMPCAQ10713 525 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 TRPC3Q13507 836 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms