RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PLEKHG6Q3KR16 790 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 SLC44A4Q53GD3 710 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 IL31Q6EBC2 164 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 TIGD7Q6NT04 549 aaPredicted RBP12.72□□□□□ -0.37
SNX17-208ENST00000493711 RETSATQ6NUM9 610 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 AADACL2Q6P093 401 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 DRICH1Q6PGQ1 229 aaPredicted RBP12.72□□□□□ -0.37
SNX17-208ENST00000493711 CREG2Q8IUH2 290 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 CDKL3Q8IVW4 592 aaPredicted RBP12.72□□□□□ -0.37
SNX17-208ENST00000493711 ATPAF2Q8N5M1 289 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 NSMCE1Q8WV22 266 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 UCMAQ8WVF2 138 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 ZNF599Q96NL3 588 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 TSGA13Q96PP4 275 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 KLC2Q9H0B6 622 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 ATP13A1Q9HD20 1204 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 FEZ2Q9UHY8 353 aaPredicted RBP12.72□□□□□ -0.37
SNX17-208ENST00000493711 MRPS17Q9Y2R5 130 aaKnown RBP12.72□□□□□ -0.37
SNX17-208ENST00000493711 BRWD1Q9NSI6 2320 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 CFAP69A5D8W1 941 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 OTOL1A6NHN0 477 aaPredicted RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 CCDC188H7C350 402 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 DFFAO00273 331 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 KRIT1O00522 736 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 FANCGO15287 622 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 KDELR3O43731 214 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 MFSD11O43934 449 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 STK10O94804 968 aaKnown RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 POLR2EP19388 210 aaKnown RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 DRD1P21728 446 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 CCNCP24863 283 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 HLA-FP30511 346 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 CTHP32929 405 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 OPRD1P41143 372 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 CSKP41240 450 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 GARSP41250 739 aaKnown RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 PAPOLAP51003 745 aaKnown RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 LMNB2Q03252 620 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 GBE1Q04446 702 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 IL10RBQ08334 325 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 GRSF1Q12849 480 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNX17-208ENST00000493711 RFTN1Q14699 578 aaPredicted RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 GAB4Q2WGN9 574 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 FBXO43Q4G163 708 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 FSCBQ5H9T9 825 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 PITRM1Q5JRX3 1037 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 ZNF354CQ86Y25 554 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 ARHGAP12Q8IWW6 846 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 BBS5Q8N3I7 341 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 NPWQ8N729 165 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 NAT16Q8N8M0 369 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 TERB1Q8NA31 727 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 KDM1BQ8NB78 822 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 CCNYQ8ND76 341 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 ACTL9Q8TC94 416 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 TFB1MQ8WVM0 346 aaKnown RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 TTC17Q96AE7 1141 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 HDAC11Q96DB2 347 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 HMCESQ96FZ2 354 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 LMLNQ96KR4 655 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 RUNDC3BQ96NL0 473 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 OLFM3Q96PB7 478 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 NELL2Q99435 816 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 SPON2Q9BUD6 331 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 ACE2Q9BYF1 805 aaPredicted RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 SLC39A8Q9C0K1 460 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 NOL6Q9H6R4 1146 aaKnown RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 HEBP1Q9NRV9 189 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 NDFIP2Q9NV92 336 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 IPO11Q9UI26 975 aaKnown RBP12.71□□□□□ -0.37
SNX17-208ENST00000493711 FBXL21Q9UKT6 434 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 SLC8A2Q9UPR5 921 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 OR51B4Q9Y5P0 310 aa12.71□□□□□ -0.37
SNX17-208ENST00000493711 DENND4CQ5VZ89 1909 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 TBC1D3BA6NDS4 549 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 H7C0C1 242 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 ZNF185O15231 689 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 NARSO43776 548 aaKnown RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 PRAMEF11O60813 436 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 KAT7O95251 611 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 CD70P32970 193 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 NNMTP40261 264 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 ATP5OP48047 213 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 EIF3EP60228 445 aaKnown RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 OTUD4Q01804 1114 aaKnown RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 ADCY2Q08462 1091 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 PPIDQ08752 370 aaKnown RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 LLGL1Q15334 1064 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 MLF2Q15773 248 aaPredicted RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 MBLAC2Q68D91 279 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 ZNF852Q6ZMS4 543 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 TTC8Q8TAM2 541 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 WFDC5Q8TCV5 224 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 NKD2Q969F2 451 aaPredicted RBP12.7□□□□□ -0.38
SNX17-208ENST00000493711 ALG14Q96F25 216 aa12.7□□□□□ -0.38
SNX17-208ENST00000493711 P2RY11Q96G91 374 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms