RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 TADA2BQ86TJ2 420 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 ADGRF3Q8IZF5 1079 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 GTF3C6Q969F1 213 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 SFXN1Q9H9B4 322 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 ERVMER34-1Q9H9K5 563 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 XAB2Q9HCS7 855 aaKnown RBP4.94□□□□□ -1.62
VPS13A-212ENST00000493341 AKIP1Q9NQ31 210 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 DECR2Q9NUI1 292 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 GIMAP4Q9NUV9 329 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 GTF3C4Q9UKN8 822 aa4.94□□□□□ -1.62
VPS13A-212ENST00000493341 ISY1Q9ULR0 285 aaKnown RBP4.94□□□□□ -1.62
VPS13A-212ENST00000493341 hCG_1809904A0A1W2PP81 198 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 A0A1W2PPE2 198 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 A0A1W2PQF6 199 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 A0A1W2PR64 198 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 LRRC53A6NM62 1247 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 PAGE4O60829 102 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 NDUFA10O95299 355 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 CBX6O95503 412 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 TUBBP07437 444 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 SELLP14151 372 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 ZNF8P17098 575 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-212ENST00000493341 HOXB9P17482 250 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-212ENST00000493341 HIBADHP31937 336 aaKnown RBP4.93□□□□□ -1.62
VPS13A-212ENST00000493341 SLC15A1P46059 708 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 RAD23AP54725 363 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 MFAP4P55083 255 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 TPTEP56180 551 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 GAB1Q13480 694 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 RUNX2Q13950 521 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 SF3B3Q15393 1217 aaKnown RBP4.93□□□□□ -1.62
VPS13A-212ENST00000493341 SLC10A5Q5PT55 438 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 ERMARDQ5T6L9 678 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 KAZNQ674X7 775 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 DENND2CQ68D51 928 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 C17orf99Q6UX52 265 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 DNAAF5Q86Y56 855 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 C11orf65Q8NCR3 313 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 ADPRHL1Q8NDY3 354 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 SETD9Q8NE22 299 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 APPL2Q8NEU8 664 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 MGARPQ8TDB4 240 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 AKAP1Q92667 903 aaKnown RBP eCLIP4.93□□□□□ -1.62
VPS13A-212ENST00000493341 PGAP3Q96FM1 320 aaPredicted RBP4.93□□□□□ -1.62
VPS13A-212ENST00000493341 C1orf74Q96LT6 269 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 GPR78Q96P69 363 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 MAP7D2Q96T17 732 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 ZNF768Q9H5H4 540 aaKnown RBP4.93□□□□□ -1.62
VPS13A-212ENST00000493341 SNTG1Q9NSN8 517 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 SPATS2LQ9NUQ6 558 aaKnown RBP4.93□□□□□ -1.62
VPS13A-212ENST00000493341 TMEM74BQ9NUR3 256 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 RASAL2Q9UJF2 1139 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 NENFQ9UMX5 172 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 TRPV2Q9Y5S1 764 aa4.93□□□□□ -1.62
VPS13A-212ENST00000493341 C17orf113A0A1B0GUU1 675 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 NPEPPSL1A6NEC2 478 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 VWC2LB2RUY7 222 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 RNASET2O00584 256 aaKnown RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 STRNO43815 780 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 ONECUT2O95948 504 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 QDPRP09417 244 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 C1QTNF9P0C862 333 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 STAT6P42226 847 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 GNAQP50148 359 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 EFNA5P52803 228 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 LINC00310P59036 64 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 CSTF3Q12996 717 aaKnown RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 EDRF1Q3B7T1 1238 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 ADALQ6DHV7 355 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 MOB3CQ70IA8 216 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 GSTA5Q7RTV2 222 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 PRRT2Q7Z6L0 340 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 TICAM1Q8IUC6 712 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 OR6J1Q8NGC5 347 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 PRPF31Q8WWY3 499 aaKnown RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 LOXL4Q96JB6 756 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 FYTTD1Q96QD9 318 aaKnown RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 MRPL9Q9BYD2 267 aaKnown RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 ANKRD2Q9GZV1 360 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 LTB4R2Q9NPC1 389 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 ARL15Q9NXU5 204 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 WDR35Q9P2L0 1181 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 UPB1Q9UBR1 384 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 ANAPC5Q9UJX4 755 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 FLT1P17948 1338 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 TTC36A6NLP5 189 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 TTC34A8MYJ7 566 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 KCNJ18B7U540 433 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 TAF4O00268 1085 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 CYP27B1O15528 508 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 KRT1P04264 644 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 CHRM2P08172 466 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 TBXAS1P24557 533 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 TYK2P29597 1187 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 THPOP40225 353 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 CLK3P49761 638 aaKnown RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 OAZ1P54368 228 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 NXPH1P58417 271 aa4.92□□□□□ -1.62
VPS13A-212ENST00000493341 WDR5P61964 334 aaKnown RBP4.92□□□□□ -1.62
VPS13A-212ENST00000493341 NIPAL4Q0D2K0 466 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms