RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ADAM7Q9H2U9 754 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 MTRF1LQ9UGC7 380 aaKnown RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 FAM153AQ9UHL3 310 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 ANAPC5Q9UJX4 755 aa14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 TPX2Q9ULW0 747 aaKnown RBP14.41□□□□□ -0.1
PDZRN3-210ENST00000492909 TP73O15350 636 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 MAFKO60675 156 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 OPHN1O60890 802 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 TBL1XO60907 577 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 TBX10O75333 385 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 WEE1P30291 646 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 LTBRP36941 435 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 BASP1P80723 227 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 WASHC5Q12768 1159 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 TTMPQ5BVD1 217 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 ANKRD20A2Q5SQ80 823 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 C6orf118Q5T5N4 469 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 CFAP58Q5T655 872 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 ANKRD20A1Q5TYW2 823 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 ANKRD20A3Q5VUR7 823 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 POTEHQ6S545 545 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 ARHGAP36Q6ZRI8 547 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 SETD3Q86TU7 594 aaPredicted RBP14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 NPAS3Q8IXF0 933 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 TDRD5Q8NAT2 981 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 HMCESQ96FZ2 354 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 VAT1Q99536 393 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 KIF9Q9HAQ2 790 aa14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 IPO11Q9UI26 975 aaKnown RBP14.4□□□□□ -0.1
PDZRN3-210ENST00000492909 PTPN3P26045 913 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 SKOR1P84550 965 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 USP4Q13107 963 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 MORF4L2Q15014 288 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 ZNF77Q15935 545 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CTC1Q2NKJ3 1217 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 MPPE1Q53F39 396 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 RNASEH2BQ5TBB1 312 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CES5AQ6NT32 575 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 HIBCHQ6NVY1 386 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 FOXR1Q6PIV2 292 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 ZNF354CQ86Y25 554 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 PPIL6Q8IXY8 311 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 ZNF567Q8N184 647 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 TAB3Q8N5C8 712 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CELF5Q8N6W0 485 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 RIN3Q8TB24 985 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 FGF13Q92913 245 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 ARL8AQ96BM9 186 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 TSPYL1Q9H0U9 437 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 MAGEH1Q9H213 219 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 RAB6BQ9NRW1 208 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 TBC1D14Q9P2M4 693 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 TBC1D30Q9Y2I9 924 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 RRP15Q9Y3B9 282 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 ILVBLA1L0T0 632 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 H0Y626 953 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 H3BQ06 376 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 MATN3O15232 486 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 RHOCP08134 193 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CCNB1P14635 433 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 HSPA9P38646 679 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 GNA12Q03113 381 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 SERINC3Q13530 473 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 ANO4Q32M45 955 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 ATAT1Q5SQI0 421 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 MPP7Q5T2T1 576 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 RHBDF2Q6PJF5 856 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 GET4Q7L5D6 327 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 PID1Q7Z2X4 250 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 DDI1Q8WTU0 396 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CPT1BQ92523 772 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 ARHGEF2Q92974 986 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CAPS2Q9BXY5 557 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CEP41Q9BYV8 373 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 GDE1Q9NZC3 331 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CLEC1BQ9P126 229 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 KLHL8Q9P2G9 620 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 CDH22Q9UJ99 828 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 TRHDEQ9UKU6 1024 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 SHOC2Q9UQ13 582 aa14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 FARP1Q9Y4F1 1045 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-210ENST00000492909 MYOFQ9NZM1 2061 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 A6NNZ2 444 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 SMAPO00193 183 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 LUC7L3O95232 432 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 CYBBP04839 570 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 ETFBP38117 255 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 IFI35P80217 286 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 TFF2Q03403 129 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 ZBTB17Q13105 803 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 COL19A1Q14993 1142 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 TUBB8Q3ZCM7 444 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 TEX44Q53QW1 395 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 FAM182AQ5T1J6 154 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 TPGS1Q6ZTW0 290 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 HOOK3Q86VS8 718 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 CARNMT1Q8N4J0 409 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 FATE1Q969F0 183 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 OTUB2Q96DC9 234 aa14.38□□□□□ -0.11
PDZRN3-210ENST00000492909 PABPC5Q96DU9 382 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms