RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 SERGEFQ9UGK8 458 aa15.47■□□□□ 0.07
USP39-217ENST00000491659 VPS51Q9UID3 782 aa15.47■□□□□ 0.07
USP39-217ENST00000491659 HS3ST2Q9Y278 367 aa15.47■□□□□ 0.07
USP39-217ENST00000491659 TCRBV5S1A1TA0A578 114 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 ILVBLA1L0T0 632 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 FAM47DPA6NHR8 397 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 LRRC72A6NJI9 287 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 TMCO5BA8MYB1 307 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 C1QTNF3-AMACRE9PGA6 284 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 ALOX15BO15296 676 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 CCP110O43303 1012 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 SNAP91O60641 907 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 KCNK5O95279 499 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 ADRB1P08588 477 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 SRCP12931 536 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 RRM1P23921 792 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 NOVA1P51513 510 aaKnown RBP15.46■□□□□ 0.07
USP39-217ENST00000491659 CLCN6P51797 869 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 ZNF143P52747 638 aaPredicted RBP15.46■□□□□ 0.07
USP39-217ENST00000491659 KLHL30Q0D2K2 578 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 GRIK2Q13002 908 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 ZSCAN23Q3MJ62 389 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 FIGNQ5HY92 759 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 FAM46CQ5VWP2 391 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 KIAA0895LQ68EN5 471 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 PSAPL1Q6NUJ1 521 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 RWDD4Q6NW29 188 aaKnown RBP15.46■□□□□ 0.07
USP39-217ENST00000491659 Q6ZVU0 165 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 DRC7Q8IY82 874 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 CCDC185Q8N715 623 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 BIRC7Q96CA5 298 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 TBC1D31Q96DN5 1066 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 VCPIP1Q96JH7 1222 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 TTYH3Q9C0H2 523 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 HAUS4Q9H6D7 363 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 RETREG1Q9H6L5 497 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 ATP13A1Q9HD20 1204 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 AIPL1Q9NZN9 384 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 ADAMTS1Q9UHI8 967 aa15.46■□□□□ 0.07
USP39-217ENST00000491659 FARP1Q9Y4F1 1045 aaPredicted RBP15.46■□□□□ 0.07
USP39-217ENST00000491659 CACNA1EQ15878 2313 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 LAMA1P25391 3075 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 A0A0D9SEW6 157 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 CBX4O00257 560 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 BNIP3LO60238 219 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 RHOQP17081 205 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 GOT1P17174 413 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 CSRP1P21291 193 aaKnown RBP15.45■□□□□ 0.06
USP39-217ENST00000491659 CD27P26842 260 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 ETFBP38117 255 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 PRKCIP41743 596 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 MAPKAPK2P49137 400 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 AFF3P51826 1226 aaKnown RBP15.45■□□□□ 0.06
USP39-217ENST00000491659 UBASH3AP57075 661 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 RPL7AP62424 266 aaKnown RBP15.45■□□□□ 0.06
USP39-217ENST00000491659 GNA12Q03113 381 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 SCAPQ12770 1279 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 TEAD4Q15561 434 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 EFHC2Q5JST6 749 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 PPP1R15BQ5SWA1 713 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 MANEALQ5VSG8 457 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 RETSATQ6NUM9 610 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 SCYL2Q6P3W7 929 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 SLFN11Q7Z7L1 901 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 AADATQ8N5Z0 425 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 OR7D4Q8NG98 312 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 CNPY3Q9BT09 278 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 SPON2Q9BUD6 331 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 NEUROG2Q9H2A3 272 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 SLC32A1Q9H598 525 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 PARVAQ9NVD7 372 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 TAS2R14Q9NYV8 317 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 ZNF212Q9UDV6 495 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 CHD5Q8TDI0 1954 aa15.45■□□□□ 0.06
USP39-217ENST00000491659 MCF2LO15068 1137 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 LRIG2O94898 1065 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 CER1O95813 267 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 PLEKP08567 350 aaPredicted RBP15.44■□□□□ 0.06
USP39-217ENST00000491659 GALCP54803 685 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 ADPRHP54922 357 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 AIF1P55008 147 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 TDRD12Q587J7 1177 aaKnown RBP15.44■□□□□ 0.06
USP39-217ENST00000491659 E4F1Q66K89 784 aaPredicted RBP15.44■□□□□ 0.06
USP39-217ENST00000491659 C22orf39Q6P5X5 142 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 NCEH1Q6PIU2 408 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 IL27RAQ6UWB1 636 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 LINGO4Q6UY18 593 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 ZNF571Q7Z3V5 609 aaPredicted RBP15.44■□□□□ 0.06
USP39-217ENST00000491659 OR2I1PQ8NGU4 316 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 OR2T34Q8NGX1 318 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 OR14C36Q8NHC7 312 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 IQCDQ96DY2 449 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 DNAAF2Q9NVR5 837 aaKnown RBP15.44■□□□□ 0.06
USP39-217ENST00000491659 TMEM248Q9NWD8 314 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 TMEM131Q92545 1883 aa15.44■□□□□ 0.06
USP39-217ENST00000491659 ASCC3Q8N3C0 2202 aaKnown RBP15.43■□□□□ 0.06
USP39-217ENST00000491659 A0A1W2PQJ5 194 aa15.43■□□□□ 0.06
USP39-217ENST00000491659 FAM72CH0Y354 149 aa15.43■□□□□ 0.06
USP39-217ENST00000491659 SLC7A4O43246 635 aa15.43■□□□□ 0.06
USP39-217ENST00000491659 ATMINO43313 823 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms