RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 GRIN3AQ8TCU5 1115 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 ADAMTS14Q8WXS8 1223 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 SERAC1Q96JX3 654 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 NOX5Q96PH1 765 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 DDX50Q9BQ39 737 aaKnown RBP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 MUC3BQ9H195 1237 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 PDCL3Q9H2J4 239 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 SYNCQ9H7C4 482 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 SGK2Q9HBY8 427 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 ARHGEF38Q9NXL2 777 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 ARHGAP20Q9P2F6 1191 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 VPS51Q9UID3 782 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 VPS28Q9UK41 221 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 NCKAP1Q9Y2A7 1128 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 NFE2L3Q9Y4A8 694 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 ZZEF1O43149 2961 aa9.15□□□□□ -0.95
HDAC3-211ENST00000491581 EPG5Q9HCE0 2579 aa9.15□□□□□ -0.95
HDAC3-211ENST00000491581 TPRP12270 2363 aaKnown RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 CELSR3Q9NYQ7 3312 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 TARSL2A2RTX5 802 aaKnown RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 GTPBP10A4D1E9 387 aaKnown RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF821O75541 412 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 RHOCP08134 193 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 UCHL3P15374 230 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 GOT1P17174 413 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ACVRL1P37023 503 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 GRIA4P48058 902 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 CXCR3P49682 368 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 CLDN2P57739 230 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 POLR2FP61218 127 aaKnown RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 FMO1Q01740 532 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ZBTB16Q05516 673 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 SLC14A1Q13336 389 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF177Q13360 481 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 KRT31Q15323 416 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF423Q2M1K9 1284 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF542PQ5EBM4 170 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 PIP5KL1Q5T9C9 394 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 USP30Q70CQ3 517 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 DRC7Q8IY82 874 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 SH2D3CQ8N5H7 860 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 EID2Q8N6I1 236 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 CCDC185Q8N715 623 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 OR2T34Q8NGX1 318 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 EPS8L1Q8TE68 723 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 VOPP1Q96AW1 172 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 C11orf70Q9BRQ4 267 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 WDCPQ9H6R7 721 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 FAM207AQ9NSI2 230 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 FANCLQ9NW38 375 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF212Q9UDV6 495 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 ADAMTS1Q9UHI8 967 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 GGT7Q9UJ14 662 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 TMEM59LQ9UK28 342 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 NOCTQ9UK39 431 aaKnown RBP9.14□□□□□ -0.95
HDAC3-211ENST00000491581 LRRK1Q38SD2 2015 aa9.14□□□□□ -0.95
HDAC3-211ENST00000491581 COL5A1P20908 1838 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 A0A1B0GTQ1 180 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 E9PAM4 449 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 VILLO15195 856 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 SLC31A1O15431 190 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ATP9BO43861 1147 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 RNASEH1O60930 286 aaKnown RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 MOCS3O95396 460 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 CD160O95971 181 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 GLI1P08151 1106 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ITIH2P19823 946 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 C5AR1P21730 350 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 CD38P28907 300 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 CDH5P33151 784 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 PLK1P53350 603 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ARF5P84085 180 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 PTP4A2Q12974 167 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ARID5BQ14865 1188 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 MEA1Q16626 185 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ARSIQ5FYB1 569 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 RABGAP1LQ5R372 815 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 TPRG1LQ5T0D9 272 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 CDKAL1Q5VV42 579 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 SEL1L3Q68CR1 1132 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 CCNI2Q6ZMN8 369 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 SND1Q7KZF4 910 aaKnown RBP eCLIP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ERICH1Q86X53 443 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 CCDC117Q8IWD4 279 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 PYROXD2Q8N2H3 581 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ATP11CQ8NB49 1132 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 TMEM35BQ8NCS4 154 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF397Q8NF99 534 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 OR2A12Q8NGT7 310 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 NT5C3BQ969T7 300 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 SPON2Q9BUD6 331 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ACE2Q9BYF1 805 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ZDHHC5Q9C0B5 715 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 KLC2Q9H0B6 622 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 HSD3B7Q9H2F3 369 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ASNSD1Q9NWL6 643 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 UCKL1Q9NWZ5 548 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms