RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	PCDH9	Q9HC56	1237 aa		13.85	□□□□□ -0.19
NUP188-208	ENST00000491502	FAM86C1	Q9NVL1	165 aa		13.85	□□□□□ -0.19
NUP188-208	ENST00000491502	WHRN	Q9P202	907 aa		13.85	□□□□□ -0.19
NUP188-208	ENST00000491502	CFAP97	Q9P2B7	532 aa		13.85	□□□□□ -0.19
NUP188-208	ENST00000491502	SH3BP1	Q9Y3L3	701 aa		13.85	□□□□□ -0.19
NUP188-208	ENST00000491502	HELZ	P42694	1942 aa	Known RBP	13.85	□□□□□ -0.19
NUP188-208	ENST00000491502	COL4A3	Q01955	1670 aa		13.85	□□□□□ -0.19
NUP188-208	ENST00000491502	PIEZO1	Q92508	2521 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	BCLAF3	A2AJT9	711 aa	Known RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	OTOL1	A6NHN0	477 aa	Predicted RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	MTSS1	O43312	755 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	MSI1	O43347	362 aa	Known RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	ATP8B1	O43520	1251 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	LATS1	O95835	1130 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	MOCS2	O96007	188 aa	Predicted RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	KRT14	P02533	472 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	DRD1	P21728	446 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	AMPD1	P23109	780 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	CCR3	P51677	355 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	NRL	P54845	237 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	CSTF1	Q05048	431 aa	Known RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	ADCY2	Q08462	1091 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	MTAP	Q13126	283 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	FBXO43	Q4G163	708 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	TMEM196	Q5HYL7	178 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	RWDD4	Q6NW29	188 aa	Known RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	ALYREF	Q86V81	257 aa	Known RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	PYROXD2	Q8N2H3	581 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	TFB1M	Q8WVM0	346 aa	Known RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	P2RY13	Q9BPV8	354 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	ACBD3	Q9H3P7	528 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	NUDT5	Q9UKK9	219 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	ZNF510	Q9Y2H8	683 aa		13.84	□□□□□ -0.19
NUP188-208	ENST00000491502	ATG13	O75143	517 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	LRIG2	O94898	1065 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	IGLV3-27	P01718	113 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	ERCC2	P18074	760 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	CXCL12	P48061	93 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	PGF	P49763	221 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	GALK1	P51570	392 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	ZNF33A	Q06730	810 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	CCIN	Q13939	588 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	NCBP2-AS2	Q69YL0	99 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	FBXO38	Q6PIJ6	1188 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	CASKIN2	Q8WXE0	1202 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	ZFR	Q96KR1	1074 aa	Known RBP	13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	TRIM51	Q9BSJ1	452 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	KLF16	Q9BXK1	252 aa	Predicted RBP	13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	FOXP3	Q9BZS1	431 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	PRMT8	Q9NR22	394 aa	Predicted RBP	13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	LSM7	Q9UK45	103 aa	Known RBP	13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	HS3ST4	Q9Y661	456 aa		13.83	□□□□□ -0.2
NUP188-208	ENST00000491502	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.82	□□□□□ -0.2
NUP188-208	ENST00000491502		E9PAM4	449 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502		F5H5T6	163 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	DCLK1	O15075	740 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	TBX18	O95935	607 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	ADH1C	P00326	375 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	IFNB1	P01574	187 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	PECAM1	P16284	738 aa	Predicted RBP	13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	RHOQ	P17081	205 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	HOXC13	P31276	330 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	CLCN6	P51797	869 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	MRPS25	P82663	173 aa	Known RBP	13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	DHCR24	Q15392	516 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	SLC45A4	Q5BKX6	768 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	RABGAP1L	Q5R372	815 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	HEATR6	Q6AI08	1181 aa	Known RBP	13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	FSTL4	Q6MZW2	842 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	HTR3D	Q70Z44	454 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	HDX	Q7Z353	690 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	ZC3H18	Q86VM9	953 aa	Known RBP	13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	PHOX2B	Q99453	314 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	TMEM121	Q9BTD3	319 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	TRIM31	Q9BZY9	425 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	ZYG11B	Q9C0D3	744 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	DPH5	Q9H2P9	285 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	ZSCAN32	Q9NX65	697 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	PAK5	Q9P286	719 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	SNX24	Q9Y343	169 aa		13.82	□□□□□ -0.2
NUP188-208	ENST00000491502	TYW5	A2RUC4	315 aa	Known RBP	13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	WASH4P	A8MWX3	477 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	FAM72C	H0Y354	149 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	ACSL4	O60488	711 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	PAPSS2	O95340	614 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	HMBS	P08397	361 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	EIF2D	P41214	584 aa	Known RBP	13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	TNNT3	P45378	269 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	CARS	P49589	748 aa	Known RBP	13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	GAD2	Q05329	585 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	AUH	Q13825	339 aa	Known RBP	13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	P3H1	Q32P28	736 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	PREPL	Q4J6C6	727 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	MS4A13	Q5J8X5	152 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	FAM72A	Q5TYM5	149 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	FAM72D	Q6L9T8	149 aa		13.81	□□□□□ -0.2
NUP188-208	ENST00000491502	RHBDF2	Q6PJF5	856 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms