RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 KLK10O43240 276 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 DHHO43323 396 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 HNRNPRO43390 633 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 RASSF9O75901 435 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 UNC5CO95185 931 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 C22orf31O95567 290 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 SCGB1D1O95968 90 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 IL6RP08887 468 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 PRR35P0CG20 571 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 PEPDP12955 493 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 ATF7P17544 494 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 MPGP29372 298 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 CYP2C18P33260 490 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 KCNJ5P48544 419 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 RCAN1P53805 252 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 SLC10A2Q12908 348 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 STK4Q13043 487 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 IRF3Q14653 427 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 MED22Q15528 200 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 EZH2Q15910 746 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 BAK1Q16611 211 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 PROSER3Q2NL68 480 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF484Q5JVG2 852 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 ARHGAP40Q5TG30 622 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 SFRP4Q6FHJ7 346 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 SLC2A7Q6PXP3 512 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 LAYNQ6UX15 382 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF66Q6ZN08 573 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 PLPPR4Q7Z2D5 763 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 NUP54Q7Z3B4 507 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF804AQ7Z570 1209 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 ADSSL1Q8N142 457 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 C17orf53Q8N3J3 647 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 METTL6Q8TCB7 284 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 SMCR8Q8TEV9 937 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 SLC22A17Q8WUG5 538 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 SEPT1Q8WYJ6 367 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 CENPTQ96BT3 561 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 MECRQ9BV79 373 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 FAM129AQ9BZQ8 928 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 ZWILCHQ9H900 591 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 CNNM1Q9NRU3 951 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 DLL3Q9NYJ7 618 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 TBC1D14Q9P2M4 693 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 DNAJB9Q9UBS3 223 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 CORO1CQ9ULV4 474 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 RRP7AQ9Y3A4 280 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 KIF13AQ9H1H9 1805 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 ABCC10Q5T3U5 1492 aa3.42□□□□□ -1.86
DEPDC1-204ENST00000489862 FNDC1Q4ZHG4 1894 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 URADA6NGE7 173 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 TTC36A6NLP5 189 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 IFNL4K9M1U5 179 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 GTPBP1O00178 669 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 QSOX1O00391 747 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 SLC16A3O15427 465 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ENTPD3O75355 529 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 JTBO76095 146 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 NTSR2O95665 410 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 LATS1O95835 1130 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 FESP07332 822 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 TUBBP07437 444 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ANXA6P08133 673 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 UBL4AP11441 157 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 RARGP13631 454 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ENGP17813 658 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ABCD1P33897 745 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 EIF2DP41214 584 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 PXNP49023 591 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 EEFSECP57772 596 aaKnown RBP3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 SSBP2P81877 361 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 FHL3Q13643 280 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 DCTN1Q14203 1278 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 NFE2L1Q14494 772 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 IQCB1Q15051 598 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 E2F5Q15329 346 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 GPR68Q15743 365 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 NPY5RQ15761 445 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 KYNUQ16719 465 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 SLC5A9Q2M3M2 681 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF674Q2M3X9 581 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 MTX3Q5HYI7 312 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 PCID2Q5JVF3 399 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 TEDDM1Q5T9Z0 273 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF626Q68DY1 528 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 NAA16Q6N069 864 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ANKRD16Q6P6B7 361 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 CASC1Q6TDU7 716 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ATF7IPQ6VMQ6 1270 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 CLEC17AQ6ZS10 378 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 SLC29A4Q7RTT9 530 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 KRT28Q7Z3Y7 464 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 UBE2Q1Q7Z7E8 422 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 GLRX5Q86SX6 157 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ZNF619Q8N2I2 560 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 MOSPD2Q8NHP6 518 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 ATG4AQ8WYN0 398 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 C3orf49Q96BT1 292 aa3.41□□□□□ -1.86
DEPDC1-204ENST00000489862 SLX1AQ9BQ83 275 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms