RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CDKN3Q16667 212 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 CHSY1Q86X52 802 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 SLC22A18ASQ8N1D0 253 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 SERPINB11Q96P15 392 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 DUSP23Q9BVJ7 150 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 EVA1BQ9NVM1 165 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 DNAJC28Q9NX36 388 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 TJP2Q9UDY2 1190 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 MCF2LO15068 1137 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 ATP9BO43861 1147 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 AKT2P31751 481 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 PLK1P53350 603 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 NFKB2Q00653 900 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 DLG2Q15700 870 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 ZNF284Q2VY69 593 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 LINC00303Q3SY05 128 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 ZC3H12AQ5D1E8 599 aaKnown RBP16.64■□□□□ 0.25
USP48-210ENST00000489108 C6orf132Q5T0Z8 1188 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 PIP5KL1Q5T9C9 394 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 CIR1Q86X95 450 aaPredicted RBP16.64■□□□□ 0.25
USP48-210ENST00000489108 CCAR2Q8N163 923 aaKnown RBP16.64■□□□□ 0.25
USP48-210ENST00000489108 ARRDC3Q96B67 414 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 GRAMD1AQ96CP6 724 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 ZSWIM1Q9BR11 485 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 PCDHGA8Q9Y5G5 932 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 BOD1L1Q8NFC6 3051 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 RP1P56715 2156 aa16.64■□□□□ 0.25
USP48-210ENST00000489108 TERTO14746 1132 aaKnown RBP16.63■□□□□ 0.25
USP48-210ENST00000489108 BNIP3LO60238 219 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 TNFSF15O95150 251 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 HNRNPA2B1P22626 353 aaKnown RBP16.63■□□□□ 0.25
USP48-210ENST00000489108 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
USP48-210ENST00000489108 NNTQ13423 1086 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 CBWD6Q4V339 395 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 CBWD3Q5JTY5 395 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 CBWD5Q5RIA9 395 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 SYPL2Q5VXT5 272 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 NEK5Q6P3R8 708 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 GUSBP11Q6P575 273 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 CRTC1Q6UUV9 634 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 GCNT7Q6ZNI0 430 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 Q6ZSR6 202 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 Q6ZVU0 165 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 EFL1Q7Z2Z2 1120 aaKnown RBP16.63■□□□□ 0.25
USP48-210ENST00000489108 ABI3BPQ7Z7G0 1075 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 TAC4Q86UU9 113 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 HORMAD1Q86X24 394 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 UBR7Q8N806 425 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 ERCC4Q92889 916 aaPredicted RBP16.63■□□□□ 0.25
USP48-210ENST00000489108 ALG14Q96F25 216 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 IFT43Q96FT9 208 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 HSFY1Q96LI6 401 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 CCNL2Q96S94 520 aaPredicted RBP16.63■□□□□ 0.25
USP48-210ENST00000489108 WDR70Q9NW82 654 aa16.63■□□□□ 0.25
USP48-210ENST00000489108 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 M0QYV0 167 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 CASC3O15234 703 aaKnown RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 ALOX15BO15296 676 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 STX10O60499 249 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 FBXO21O94952 628 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 CALCAP01258 141 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 APOEP02649 317 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 VASPP50552 380 aaPredicted RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 HNRNPKP61978 463 aaKnown RBP eCLIP16.62■□□□□ 0.25
USP48-210ENST00000489108 LRMPQ12912 555 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 ZNF177Q13360 481 aaPredicted RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 CNGA2Q16280 664 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 OR6B2Q6IFH4 312 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 CXorf57Q6NSI4 855 aaKnown RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 ZCCHC8Q6NZY4 707 aaKnown RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 RBM44Q6ZP01 1051 aaKnown RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 ARL14Q8N4G2 192 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 FAM149B1Q96BN6 582 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 BMFQ96LC9 184 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 SLC25A13Q9UJS0 675 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 ZFR2Q9UPR6 939 aaKnown RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 COQ4Q9Y3A0 265 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 UBR5O95071 2799 aaPredicted RBP16.62■□□□□ 0.25
USP48-210ENST00000489108 DOPEY2Q9Y3R5 2298 aa16.62■□□□□ 0.25
USP48-210ENST00000489108 F5H5T6 163 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 RNF225M0QZC1 329 aaPredicted RBP16.61■□□□□ 0.25
USP48-210ENST00000489108 PCDH8O95206 1070 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 CTSLP07711 333 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 FZD2Q14332 565 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 ZCWPW2Q504Y3 356 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 TMEM270Q6UE05 265 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 ATG14Q6ZNE5 492 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 CLEC14AQ86T13 490 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 GUF1Q8N442 669 aaKnown RBP16.61■□□□□ 0.25
USP48-210ENST00000489108 ZNF548Q8NEK5 533 aaPredicted RBP16.61■□□□□ 0.25
USP48-210ENST00000489108 OR52K2Q8NGK3 314 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 WDR36Q8NI36 951 aaKnown RBP16.61■□□□□ 0.25
USP48-210ENST00000489108 BTN2A3PQ96KV6 586 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 PRMT1Q99873 361 aaKnown RBP16.61■□□□□ 0.25
USP48-210ENST00000489108 FEM1AQ9BSK4 669 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 STARD5Q9NSY2 213 aa16.61■□□□□ 0.25
USP48-210ENST00000489108 TRPM6Q9BX84 2022 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms