RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 RASA4BC9J798 803 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 SGK1O00141 431 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 CBX4O00257 560 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 RASA4O43374 803 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 GALR2O43603 387 aaPredicted RBP16.33■□□□□ 0.2
HDAC7-224ENST00000488927 KDELR3O43731 214 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 SYNCRIPO60506 623 aaKnown RBP16.33■□□□□ 0.2
HDAC7-224ENST00000488927 ADAM23O75077 832 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 ZFXP17010 805 aaPredicted RBP16.33■□□□□ 0.2
HDAC7-224ENST00000488927 AMPD1P23109 780 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 CETN2P41208 172 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 IL12RB1P42701 662 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 RWDD2BP57060 319 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 COPS2P61201 443 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 CRY1Q16526 586 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 AFMIDQ63HM1 303 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 PKN3Q6P5Z2 889 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 ZNF354CQ86Y25 554 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 LRRC49Q8IUZ0 686 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 PCDH19Q8TAB3 1148 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 MRGPRX3Q96LB0 322 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 RNF157Q96PX1 679 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 ACOX2Q99424 681 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 TMEM245Q9H330 911 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 FBRSQ9HAH7 460 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.2
HDAC7-224ENST00000488927 C3orf70A6NLC5 250 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-224ENST00000488927 ZMPSTE24O75844 475 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 ALDH1A2O94788 518 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 EPHX1P07099 455 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 HOXA6P31267 233 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 ACVRL1P37023 503 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 CTSOP43234 321 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-224ENST00000488927 MMRN1Q13201 1228 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 SERINC3Q13530 473 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 TFDP2Q14188 446 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 TSTD1Q8NFU3 115 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 CASKIN2Q8WXE0 1202 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 RNF25Q96BH1 459 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-224ENST00000488927 HMCESQ96FZ2 354 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 FAM126AQ9BYI3 521 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-224ENST00000488927 KLC2Q9H0B6 622 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 KCNH6Q9H252 994 aa16.32■□□□□ 0.2
HDAC7-224ENST00000488927 NOL6Q9H6R4 1146 aaKnown RBP16.32■□□□□ 0.2
HDAC7-224ENST00000488927 EDDM13A0A1B0GTR0 161 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 TARSL2A2RTX5 802 aaKnown RBP16.31■□□□□ 0.2
HDAC7-224ENST00000488927 ANTXRLA6NF34 631 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 APOL1O14791 398 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 ATP9BO43861 1147 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 SNAP91O60641 907 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 APBB3O95704 486 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 FTCDO95954 541 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
HDAC7-224ENST00000488927 PEX5P50542 639 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 NRLP54845 237 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 SATB1Q01826 763 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 PAFAH1B3Q15102 231 aaKnown RBP16.31■□□□□ 0.2
HDAC7-224ENST00000488927 PPP2R5EQ16537 467 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 TAZQ16635 292 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 HNRNPA1L2Q32P51 320 aaKnown RBP16.31■□□□□ 0.2
HDAC7-224ENST00000488927 ZNF528Q3MIS6 628 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 TFDP3Q5H9I0 405 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 SPOCD1Q6ZMY3 1216 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 ARHGAP12Q8IWW6 846 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 SH2D3CQ8N5H7 860 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 NPWQ8N729 165 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 ATP11CQ8NB49 1132 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 KRT35Q92764 455 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 MYO19Q96H55 970 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 HES6Q96HZ4 224 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 CELF6Q96J87 481 aaKnown RBP16.31■□□□□ 0.2
HDAC7-224ENST00000488927 RPL10LQ96L21 214 aaKnown RBP16.31■□□□□ 0.2
HDAC7-224ENST00000488927 CEP44Q9C0F1 390 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 SLC39A8Q9C0K1 460 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 ZDHHC4Q9NPG8 344 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 EFR3BQ9Y2G0 817 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 RAD54BQ9Y620 910 aa16.31■□□□□ 0.2
HDAC7-224ENST00000488927 CCDC163A0A0D9SF12 145 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 A0A1W2PQF6 199 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 WASH3PC4AMC7 463 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 DFFAO00273 331 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 MX2P20592 715 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 PRKCHP24723 683 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 WASP42768 502 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 CDKN2BP42772 138 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 MARCKSL1P49006 195 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 STK19P49842 368 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-224ENST00000488927 SERPINH1P50454 418 aaKnown RBP16.3■□□□□ 0.2
HDAC7-224ENST00000488927 PAPOLAP51003 745 aaKnown RBP16.3■□□□□ 0.2
HDAC7-224ENST00000488927 ARF5P84085 180 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 CAMK2GQ13555 558 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-224ENST00000488927 ANGPT1Q15389 498 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 INO80DQ53TQ3 878 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-224ENST00000488927 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 SLC9A4Q6AI14 798 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 MFSD7Q6UXD7 560 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 TMEM92Q6UXU6 159 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 BZW1Q7L1Q6 419 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms