RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 XRCC4Q13426 336 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 TDGQ13569 410 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 BYSLQ13895 437 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 DPYSQ14117 519 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 DMC1Q14565 340 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 PAFAH1B3Q15102 231 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 CCNG2Q16589 344 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 EML3Q32P44 896 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 FAM133BQ5BKY9 247 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 PPM1JQ5JR12 505 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 FAM72AQ5TYM5 149 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 NCBP2-AS2Q69YL0 99 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 SLC9A4Q6AI14 798 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 TRIM68Q6AZZ1 485 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 GRAMD4Q6IC98 578 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 SDE2Q6IQ49 451 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 FAM72DQ6L9T8 149 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 CYP4V2Q6ZWL3 525 aaPredicted RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 C14orf80Q86SX3 495 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 FAM72BQ86X60 149 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 TMEM25Q86YD3 366 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 CREG2Q8IUH2 290 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 KLHL7Q8IXQ5 586 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 FAM217AQ8IXS0 508 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 AHI1Q8N157 1196 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 UMODL1-AS1Q8N2C9 162 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 PLD5Q8N7P1 536 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 NAT16Q8N8M0 369 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 PCDH19Q8TAB3 1148 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 FAM71BQ8TC56 605 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 WFIKKN2Q8TEU8 576 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 IGSF8Q969P0 613 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 FAF2Q96CS3 445 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 SHDQ96IW2 340 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 MS4A14Q96JA4 679 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 PPP1R2P1Q96PQ5 205 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 PRMT1Q99873 361 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 RTKNQ9BST9 563 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 AP1M1Q9BXS5 423 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 CIPCQ9C0C6 399 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 ZMYND15Q9H091 742 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 C8orf33Q9H7E9 229 aaPredicted RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 KCNK12Q9HB15 430 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 ANLNQ9NQW6 1124 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 GOLGA6AQ9NYA3 693 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 FBXL21Q9UKT6 434 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 TTLL3Q9Y4R7 772 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 MRFAP1Q9Y605 127 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 ZNF462Q96JM2 2506 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 OTOGLQ3ZCN5 2332 aa7.12□□□□□ -1.27
UBR4-214ENST00000486515 TEP1Q99973 2627 aaKnown RBP7.12□□□□□ -1.27
UBR4-214ENST00000486515 ANKRD17O75179 2603 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 C3orf70A6NLC5 250 aaPredicted RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 RASA4BC9J798 803 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 E7EVH7 732 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ANHXE9PGG2 379 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 CBX4O00257 560 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 MAN2B1O00754 1011 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 DCLK1O15075 740 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 HOXC11O43248 304 aaPredicted RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 RASA4O43374 803 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 TIMM44O43615 452 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 PHF2O75151 1096 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 CNTN5O94779 1100 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ECEL1O95672 775 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 IFNB1P01574 187 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ASLP04424 464 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 APODP05090 189 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 RBP3P10745 1247 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 SRFP11831 508 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 PABPC1P11940 636 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 ARSAP15289 507 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 FCARP24071 287 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 CCNCP24863 283 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 HOXC13P31276 330 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 EIF2DP41214 584 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 RECQLP46063 649 aaPredicted RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 LMAN1P49257 510 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 FNTAP49354 379 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 PAPOLAP51003 745 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 RENBPP51606 427 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ZXDBP98169 803 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 DR1Q01658 176 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 OTUD4Q01804 1114 aaKnown RBP7.11□□□□□ -1.27
UBR4-214ENST00000486515 ZNF33AQ06730 810 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 SLC20A2Q08357 652 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ITKQ08881 620 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 GRSF1Q12849 480 aaKnown RBP eCLIP7.11□□□□□ -1.27
UBR4-214ENST00000486515 SEMA3BQ13214 749 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 SNX1Q13596 522 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 HTR4Q13639 388 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 PRPSAP1Q14558 356 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ZNF235Q14590 738 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 NOMO1Q15155 1222 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 C5orf22Q49AR2 442 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ACCSLQ4AC99 568 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 ALFQ53S48 1182 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 MANEALQ5VSG8 457 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 MARC1Q5VT66 337 aa7.11□□□□□ -1.27
UBR4-214ENST00000486515 DCAF12L1Q5VU92 463 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms