RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MYL4P12829 197 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 PHBP35232 272 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 GARSP41250 739 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 PPP3CCP48454 512 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 SARNPP82979 210 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 CDK16Q00536 496 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 SIGLEC14Q08ET2 396 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 TDGQ13569 410 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 PARP6Q2NL67 630 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 FNBP1LQ5T0N5 605 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 EMC10Q5UCC4 262 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 TRIM67Q6ZTA4 783 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 DNAJB7Q7Z6W7 309 aaPredicted RBP14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 MIB1Q86YT6 1006 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 NPAS3Q8IXF0 933 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 HS6ST3Q8IZP7 471 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 TRMT2BQ96GJ1 504 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 LRFN3Q9BTN0 628 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 PPCSQ9HAB8 311 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 GDE1Q9NZC3 331 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 PPARGC1AQ9UBK2 798 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 NOVA2Q9UNW9 492 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 HBS1LQ9Y450 684 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 OBSL1O75147 1896 aa14.94□□□□□ -0.02
POLR2J3-204ENST00000486319 A6NNZ2 444 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 PRR33A8MZF0 331 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 TBX18O95935 607 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 AGTP01019 485 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 NR1D1P20393 614 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 ATP5DP30049 168 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 ATP5C1P36542 298 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 TUBP50607 506 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 GAD2Q05329 585 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 WASHC5Q12768 1159 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 FASTKD3Q14CZ7 662 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 TAF12Q16514 161 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 BBS9Q3SYG4 887 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 TUBB8Q3ZCM7 444 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 PRSS36Q5K4E3 855 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 FAXCQ5TGI0 409 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 PIK3R6Q5UE93 754 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 NUGGCQ68CJ6 796 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 KLHDC10Q6PID8 442 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 LRRC31Q6UY01 552 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 KDM7AQ6ZMT4 941 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 ITIH5Q86UX2 942 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 CCDC13Q8IYE1 715 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 SH2D3CQ8N5H7 860 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 RTL3Q8N8U3 475 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 ATP11CQ8NB49 1132 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 ST13P5Q8NFI4 369 aaPredicted RBP14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 EPS8L3Q8TE67 593 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 PSMG2Q969U7 264 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 TCEAL4Q96EI5 215 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 CCSER2Q9H7U1 834 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 VPS37BQ9H9H4 285 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 LRRC4CQ9HCJ2 640 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 EIF2B3Q9NR50 452 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 TRPM5Q9NZQ8 1165 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 SEPT10Q9P0V9 454 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 TRHDEQ9UKU6 1024 aa14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 NYNRINQ9P2P1 1898 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-204ENST00000486319 TMEM221A6NGB7 291 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 ANHXE9PGG2 379 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 M0R296 226 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 HMGA1P17096 107 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 CEBPBP17676 345 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 CCR2P41597 374 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 LMAN1P49257 510 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 EPHA5P54756 1037 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 LONRF1Q17RB8 773 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 MSS51Q4VC12 460 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 CCDC38Q502W7 563 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 DNAJC21Q5F1R6 531 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 MS4A13Q5J8X5 152 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 HECTD3Q5T447 861 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 DENND4CQ5VZ89 1909 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 PARM1Q6UWI2 310 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 MTSS1LQ765P7 747 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 PID1Q7Z2X4 250 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 LRRC49Q8IUZ0 686 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 ANKMY2Q8IV38 441 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 TP53INP2Q8IXH6 220 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 PALM2Q8IXS6 379 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 ZNF567Q8N184 647 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 RIBC1Q8N443 379 aaPredicted RBP14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 SLC44A3Q8N4M1 653 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 NETO2Q8NC67 525 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 FBXO36Q8NEA4 188 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 TLCD1Q96CP7 247 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 LRRC39Q96DD0 335 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 TSGA13Q96PP4 275 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 XAB2Q9HCS7 855 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 KLHL8Q9P2G9 620 aaPredicted RBP14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 DNMT3LQ9UJW3 386 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 NUMBLQ9Y6R0 609 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 ZNF840PA6NDX5 716 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 SMIM23A6NLE4 172 aa14.92□□□□□ -0.02
POLR2J3-204ENST00000486319 CDH16O75309 829 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms