RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 NPIPB4C9JG80 1138 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 PPP6CO00743 305 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 CNPP09543 421 aaKnown RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 RPS6KB1P23443 525 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 HOXA7P31268 230 aaPredicted RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 PNPLA4P41247 253 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 FOXF2Q12947 444 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 ALKBH1Q13686 389 aaKnown RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 MTFR2Q6P444 385 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 ZNF474Q6S9Z5 364 aaPredicted RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 TMEM200AQ86VY9 491 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 VPS52Q8N1B4 723 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 ANKRD44Q8N8A2 993 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 ENDOVQ8N8Q3 282 aaKnown RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 EXD3Q8N9H8 876 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 HERVK_113Q902F9 699 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 KAT2BQ92831 832 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 ADAD1Q96M93 576 aaKnown RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 QTRT1Q9BXR0 403 aaKnown RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 TRIM31Q9BZY9 425 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 THAP1Q9NVV9 213 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 PTGFRNQ9P2B2 879 aa6.61□□□□□ -1.35
RTN4-214ENST00000486085 ARHGEF17Q96PE2 2063 aaPredicted RBP6.61□□□□□ -1.35
RTN4-214ENST00000486085 IFT172Q9UG01 1749 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 SGPL1O95470 568 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 AGR2O95994 175 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 CERS1P27544 350 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 ADPRHP54922 357 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 NANOS3P60323 173 aaKnown RBP6.6□□□□□ -1.35
RTN4-214ENST00000486085 UBE3AQ05086 875 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 DLGAP5Q15398 846 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 ALFQ53S48 1182 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 RUNDC3AQ59EK9 446 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 ARL13AQ5H913 290 aaPredicted RBP6.6□□□□□ -1.35
RTN4-214ENST00000486085 CBWD5Q5RIA9 395 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 MEX3CQ5U5Q3 659 aaKnown RBP6.6□□□□□ -1.35
RTN4-214ENST00000486085 LIPMQ5VYY2 423 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 MDGA2Q7Z553 956 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 GALNT16Q8N428 558 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 STAMQ92783 540 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 PPP1R10Q96QC0 940 aaKnown RBP6.6□□□□□ -1.35
RTN4-214ENST00000486085 REEP2Q9BRK0 252 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 TLR8Q9NR97 1041 aaKnown RBP6.6□□□□□ -1.35
RTN4-214ENST00000486085 KLQ9UEF7 1012 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 IPO11Q9UI26 975 aaKnown RBP6.6□□□□□ -1.35
RTN4-214ENST00000486085 FBXO4Q9UKT5 387 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 MYO3AQ8NEV4 1616 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 UGGT1Q9NYU2 1555 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 KIF1BO60333 1816 aa6.6□□□□□ -1.35
RTN4-214ENST00000486085 PRAG1Q86YV5 1406 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 SMIM35A0A1B0GVV1 85 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 VWA3AA6NCI4 1184 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 SAC3D1A6NKF1 404 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 MCIDASD6RGH6 385 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 SYN3O14994 580 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 KLK10O43240 276 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 PPFIA2O75334 1257 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 CD63P08962 238 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 PKMP14618 531 aaKnown RBP6.59□□□□□ -1.35
RTN4-214ENST00000486085 PAX3P23760 479 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 AVPR2P30518 371 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 ARHGAP25P42331 645 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 STIM1Q13586 685 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 THOC5Q13769 683 aaKnown RBP6.59□□□□□ -1.35
RTN4-214ENST00000486085 EARS2Q5JPH6 523 aaKnown RBP6.59□□□□□ -1.35
RTN4-214ENST00000486085 LVRNQ6Q4G3 990 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 CNGA4Q8IV77 575 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 SCN4BQ8IWT1 228 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 ARL14EPQ8N8R7 260 aaPredicted RBP6.59□□□□□ -1.35
RTN4-214ENST00000486085 OR52N4Q8NGI2 321 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 FAM110DQ8TAY7 271 aaPredicted RBP6.59□□□□□ -1.35
RTN4-214ENST00000486085 EVI5LQ96CN4 794 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 FAM118BQ9BPY3 351 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 EIF2AK1Q9BQI3 630 aaKnown RBP6.59□□□□□ -1.35
RTN4-214ENST00000486085 ERVK-5Q9HDB9 667 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 ARL15Q9NXU5 204 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 FLRT1Q9NZU1 646 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 PI4KBQ9UBF8 816 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 PKP3Q9Y446 797 aa6.59□□□□□ -1.35
RTN4-214ENST00000486085 CEP170BQ9Y4F5 1589 aaPredicted RBP6.59□□□□□ -1.35
RTN4-214ENST00000486085 UBR1Q8IWV7 1749 aa6.59□□□□□ -1.36
RTN4-214ENST00000486085 ANP32CO43423 234 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 USP12O75317 370 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 HOXB9P17482 250 aaPredicted RBP6.58□□□□□ -1.36
RTN4-214ENST00000486085 GSTM2P28161 218 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 EPHB2P29323 1055 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 CCR5P51681 352 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 HSF1Q00613 529 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 GHRHRQ02643 423 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 CHRNDQ07001 517 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 C10orf76Q5T2E6 689 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 MAP3K21Q5TCX8 1036 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 ANO7Q6IWH7 933 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 SLC18B1Q6NT16 456 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 SLC30A9Q6PML9 568 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 BBS12Q6ZW61 710 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 RTL10Q7L3V2 364 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 RNF144BQ7Z419 303 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 ADGRF4Q8IZF3 695 aa6.58□□□□□ -1.36
RTN4-214ENST00000486085 PAQR4Q8N4S7 273 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms