RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 HOXB9P17482 250 aaPredicted RBP4.28□□□□□ -1.72
GCFC2-209ENST00000486016 ITGB8P26012 769 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 ALDH18A1P54886 795 aaKnown RBP4.28□□□□□ -1.72
GCFC2-209ENST00000486016 ZNF284Q2VY69 593 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 FSCBQ5H9T9 825 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 FAM76BQ5HYJ3 339 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3GQ6DHY5 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3CQ6IPX1 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 ANKRD13AQ8IZ07 590 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3Q8IZP1 549 aaPredicted RBP4.28□□□□□ -1.72
GCFC2-209ENST00000486016 LRRC57Q8N9N7 239 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 HIPK3Q9H422 1215 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 Q9N2J8 555 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TMEM248Q9NWD8 314 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 ARL15Q9NXU5 204 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 FNIP2Q9P278 1114 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 CNTN6Q9UQ52 1028 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 PCDHGB2Q9Y5G2 931 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 ANO9A1A5B4 782 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 VWA5AO00534 786 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 LDB3O75112 727 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 CAMTA2O94983 1202 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 MYL3P08590 195 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 PRPH2P23942 346 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 KLRC2P26717 231 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 PPP3CCP48454 512 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 CLCN5P51795 746 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 EEF1A2Q05639 463 aaKnown RBP4.27□□□□□ -1.73
GCFC2-209ENST00000486016 SF3A3Q12874 501 aaKnown RBP eCLIP4.27□□□□□ -1.73
GCFC2-209ENST00000486016 ILF3Q12906 894 aaKnown RBP eCLIP4.27□□□□□ -1.73
GCFC2-209ENST00000486016 KIAA1324Q6UXG2 1013 aaKnown RBP4.27□□□□□ -1.73
GCFC2-209ENST00000486016 ANKS1BQ7Z6G8 1248 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 ENDOVQ8N8Q3 282 aaKnown RBP4.27□□□□□ -1.73
GCFC2-209ENST00000486016 OR1N1Q8NGS0 311 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 RSC1A1Q92681 617 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 KIAA1191Q96A73 305 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 C1QTNF4Q9BXJ3 329 aa4.27□□□□□ -1.73
GCFC2-209ENST00000486016 NTN3O00634 580 aaPredicted RBP4.26□□□□□ -1.73
GCFC2-209ENST00000486016 SLC16A5O15375 505 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 GRID2O43424 1007 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 LARGE1O95461 756 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 AVPR1AP37288 418 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 THPOP40225 353 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 CDK7P50613 346 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 BNC1Q01954 994 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 GRSF1Q12849 480 aaKnown RBP eCLIP4.26□□□□□ -1.73
GCFC2-209ENST00000486016 ZNF569Q5MCW4 686 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 C11orf96Q7Z7L8 435 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 FAM216AQ8WUB2 273 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 C8orf48Q96LL4 319 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 TMEM120AQ9BXJ8 343 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 IL36RNQ9UBH0 155 aa4.26□□□□□ -1.73
GCFC2-209ENST00000486016 HEXIM1O94992 359 aaKnown RBP4.25□□□□□ -1.73
GCFC2-209ENST00000486016 MYZAPP0CAP1 466 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 AKT1P31749 480 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 AMTP48728 403 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 DLX5P56178 289 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 POU5F1BQ06416 359 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 TRAF2Q12933 501 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 LONRF1Q17RB8 773 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 ZNF718Q3SXZ3 478 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 CREB3L2Q70SY1 520 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 DPP10Q8N608 796 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 TMEM163Q8TC26 289 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 RTP4Q96DX8 246 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 PRPF18Q99633 342 aaKnown RBP4.25□□□□□ -1.73
GCFC2-209ENST00000486016 HDHD5Q9BXW7 423 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 CERS4Q9HA82 394 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 CEP83Q9Y592 693 aa4.25□□□□□ -1.73
GCFC2-209ENST00000486016 MST1RQ04912 1400 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 AGAP5A6NIR3 686 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 ASNA1O43681 348 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 TYK2P29597 1187 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 RCAN1P53805 252 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 TMPRSS3P57727 454 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 BTBD16Q32M84 506 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 HEPHL1Q6MZM0 1159 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 MTFR2Q6P444 385 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 H1FNTQ75WM6 255 aaPredicted RBP4.24□□□□□ -1.73
GCFC2-209ENST00000486016 HORMAD2Q8N7B1 307 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 CEP76Q8TAP6 659 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 HDAC7Q8WUI4 952 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 CCDC138Q96M89 665 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 PKP4Q99569 1192 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 ERRFI1Q9UJM3 462 aaPredicted RBP4.24□□□□□ -1.73
GCFC2-209ENST00000486016 PCDHA10Q9Y5I2 948 aa4.24□□□□□ -1.73
GCFC2-209ENST00000486016 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 DENND3A2RUS2 1198 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 AQP12BA6NM10 295 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 HSPB6O14558 160 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 LINC01565O15544 149 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 PARNO95453 639 aaKnown RBP4.23□□□□□ -1.73
GCFC2-209ENST00000486016 PRKCHP24723 683 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 CYP2J2P51589 502 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 NUDT6P53370 316 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 KIF19Q2TAC6 998 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 ZNF672Q499Z4 452 aaPredicted RBP4.23□□□□□ -1.73
GCFC2-209ENST00000486016 C5orf22Q49AR2 442 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 FAM171A1Q5VUB5 890 aa4.23□□□□□ -1.73
GCFC2-209ENST00000486016 WBP2NLQ6ICG8 309 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms