RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CUL2Q13617 745 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 DRAP1Q14919 205 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 NFIL3Q16649 462 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 ZNF284Q2VY69 593 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 ACCSLQ4AC99 568 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 FAM46CQ5VWP2 391 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 OR6B2Q6IFH4 312 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 GCNT7Q6ZNI0 430 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 Q6ZVU0 165 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 EFL1Q7Z2Z2 1120 aaKnown RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 DSG4Q86SJ6 1040 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 CLEC14AQ86T13 490 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 CEP57L1Q8IYX8 460 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 CCAR2Q8N163 923 aaKnown RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 UBR7Q8N806 425 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 ZNF548Q8NEK5 533 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 OR8D1Q8WZ84 308 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 ZNF396Q96N95 335 aaPredicted RBP11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 MIS12Q9H081 205 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 USP29Q9HBJ7 922 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 PREBQ9HCU5 417 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 WDR70Q9NW82 654 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 DNAJC28Q9NX36 388 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 FAM13BQ9NYF5 915 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 NAALADL1Q9UQQ1 740 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 TLR6Q9Y2C9 796 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 PCDHGA8Q9Y5G5 932 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 UNC79Q9P2D8 2635 aa11.19□□□□□ -0.62
SMARCC1-205ENST00000483847 NEMP2A6NFY4 417 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 MCF2LO15068 1137 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 BNIP3LO60238 219 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 CTSLP07711 333 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 VDRP11473 427 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 TACR2P21452 398 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 DUSP3P51452 185 aaPredicted RBP11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 PDX1P52945 283 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 ADAM9Q13443 819 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 CBWD6Q4V339 395 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 ZC3H12AQ5D1E8 599 aaKnown RBP11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 CBWD3Q5JTY5 395 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 CBWD5Q5RIA9 395 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 PERM1Q5SV97 790 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 SYPL2Q5VXT5 272 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 SEL1L3Q68CR1 1132 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 CXorf57Q6NSI4 855 aaKnown RBP11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 LCLAT1Q6UWP7 414 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 Q6ZSR6 202 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 ABI3BPQ7Z7G0 1075 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 TAC4Q86UU9 113 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 HORMAD1Q86X24 394 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 CHSY1Q86X52 802 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 OR52K2Q8NGK3 314 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 EXTL1Q92935 676 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 ALG14Q96F25 216 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 SERPINB11Q96P15 392 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 CCNL2Q96S94 520 aaPredicted RBP11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 STARD5Q9NSY2 213 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 KLF15Q9UIH9 416 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 ZFR2Q9UPR6 939 aaKnown RBP11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 RP1P56715 2156 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 AHCTF1Q8WYP5 2266 aa11.18□□□□□ -0.62
SMARCC1-205ENST00000483847 USP9XQ93008 2570 aaPredicted RBP11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 C1QTNF3-AMACRE9PGA6 284 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 SUV39H1O43463 412 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ATP9BO43861 1147 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 FAM87AP0C7U9 286 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ZNF18P17022 549 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 HNRNPA2B1P22626 353 aaKnown RBP11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 AKT2P31751 481 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ME1P48163 572 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 IRAK1P51617 712 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 PLK1P53350 603 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 LRMPQ12912 555 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 SLC12A1Q13621 1099 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 FZD2Q14332 565 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 TGIF1Q15583 401 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 DLG2Q15700 870 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ZCWPW2Q504Y3 356 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ZCCHC8Q6NZY4 707 aaKnown RBP11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ATG14Q6ZNE5 492 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 RBM44Q6ZP01 1051 aaKnown RBP11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ARL14Q8N4G2 192 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 WDR36Q8NI36 951 aaKnown RBP11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ERCC4Q92889 916 aaPredicted RBP11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 IFT43Q96FT9 208 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 BMFQ96LC9 184 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 DUSP23Q9BVJ7 150 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 GPR27Q9NS67 375 aa11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 ATXN7L1Q9ULK2 861 aaPredicted RBP11.17□□□□□ -0.62
SMARCC1-205ENST00000483847 RELNP78509 3460 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 USP9YO00507 2555 aaPredicted RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 POM121BA6NF01 834 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 M0QYV0 167 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 RNF225M0QZC1 329 aaPredicted RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 KPNA3O00505 521 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms