RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 TTYH3Q9C0H2 523 aa12.4□□□□□ -0.42
HDLBP-239ENST00000483086 BTBD1Q9H0C5 482 aa12.4□□□□□ -0.42
HDLBP-239ENST00000483086 FBRSQ9HAH7 460 aa12.4□□□□□ -0.42
HDLBP-239ENST00000483086 DNAAF2Q9NVR5 837 aaKnown RBP12.4□□□□□ -0.42
HDLBP-239ENST00000483086 VPS28Q9UK41 221 aa12.4□□□□□ -0.42
HDLBP-239ENST00000483086 FNDC3AQ9Y2H6 1198 aaKnown RBP12.4□□□□□ -0.42
HDLBP-239ENST00000483086 TDRD6O60522 2096 aaKnown RBP12.4□□□□□ -0.42
HDLBP-239ENST00000483086 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
HDLBP-239ENST00000483086 ANKRD36A6QL64 1941 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 TRPM6Q9BX84 2022 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 SYCE3A1L190 88 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-239ENST00000483086 SRGAP2O75044 1071 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 FSBPO95073 299 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 MOCS3O95396 460 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 F9P00740 461 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 RHOCP08134 193 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 CSRP1P21291 193 aaKnown RBP12.39□□□□□ -0.43
HDLBP-239ENST00000483086 RRM1P23921 792 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 DPP6P42658 865 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-239ENST00000483086 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 E2F5Q15329 346 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 SYCP2LQ5T4T6 812 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 USP30Q70CQ3 517 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 NLRP14Q86W24 1093 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 CHST14Q8NCH0 376 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 SNX19Q92543 992 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 HAPLN3Q96S86 360 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 CAAP1Q9H8G2 361 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 SGK2Q9HBY8 427 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 TM9SF3Q9HD45 589 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 ADAM22Q9P0K1 906 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 ADAMTS1Q9UHI8 967 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 DAAM1Q9Y4D1 1078 aa12.39□□□□□ -0.43
HDLBP-239ENST00000483086 A0A1B0GTH6 734 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 FAM47DPA6NHR8 397 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 LRRC53A6NM62 1247 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 UPK3BL1B0FP48 263 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 UPK3BL2E5RIL1 263 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 CCP110O43303 1012 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-239ENST00000483086 SH3BP5O60239 455 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 RTN2O75298 545 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 RNASEH2AO75792 299 aaKnown RBP12.38□□□□□ -0.43
HDLBP-239ENST00000483086 TPM2P07951 284 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 ADRA1BP35368 520 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 ACVRL1P37023 503 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 PTPN9P43378 593 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 ZNF165P49910 485 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 ADPRHP54922 357 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 TAS2R38P59533 333 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 ARF5P84085 180 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 ELAVL3Q14576 367 aaKnown RBP12.38□□□□□ -0.43
HDLBP-239ENST00000483086 KIF19Q2TAC6 998 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 TTC31Q49AM3 519 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-239ENST00000483086 AGBL4Q5VU57 503 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 KIAA0895LQ68EN5 471 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 TRIM72Q6ZMU5 477 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 CCDC117Q8IWD4 279 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-239ENST00000483086 HDDC3Q8N4P3 179 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 OR2A12Q8NGT7 310 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 FAM172AQ8WUF8 416 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 ARRDC3Q96B67 414 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 SLC6A18Q96N87 628 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 TRIM7Q9C029 511 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 MUC3BQ9H195 1237 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 NOL6Q9H6R4 1146 aaKnown RBP12.38□□□□□ -0.43
HDLBP-239ENST00000483086 CBX8Q9HC52 389 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 PPM1HQ9ULR3 514 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 HS3ST2Q9Y278 367 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 SNX11Q9Y5W9 270 aa12.38□□□□□ -0.43
HDLBP-239ENST00000483086 OPHN1O60890 802 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 CBFA2T3O75081 653 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 LRIG2O94898 1065 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 IL1BP01584 269 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 KRT3P12035 628 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 CEACAM1P13688 526 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 CD27P26842 260 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 PBX1P40424 430 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 NSFP46459 744 aaKnown RBP12.37□□□□□ -0.43
HDLBP-239ENST00000483086 SULT2A1Q06520 285 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 CNTN1Q12860 1018 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 NR1I3Q14994 352 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 HLA-BQ31612 363 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-239ENST00000483086 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDLBP-239ENST00000483086 STRADAQ7RTN6 431 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-239ENST00000483086 SETD3Q86TU7 594 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-239ENST00000483086 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 DRC7Q8IY82 874 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 MCOLN2Q8IZK6 566 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 ARFGAP1Q8N6T3 406 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 DCAF4L2Q8NA75 395 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 NETO2Q8NC67 525 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 C3orf20Q8ND61 904 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 ANKRD20A12PQ8NF67 263 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 GANCQ8TET4 914 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms