RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 CLIC1O00299 241 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 AKAP8O43823 692 aaKnown RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TMPRSS11DO60235 418 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 ONECUT2O95948 504 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 C1SP09871 688 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TSPY3P0CV98 308 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TSPY8P0CW00 308 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TNNT1P13805 278 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 LAG3P18627 525 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 ABCD1P33897 745 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 FOLR3P41439 243 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 GPD2P43304 727 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 CPA2P48052 419 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 RPS6KA3P51812 740 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 PPP5CP53041 499 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 SUMO2P61956 95 aaKnown RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 WDR5P61964 334 aaKnown RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TSPY1Q01534 308 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 CFHR3Q02985 330 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 KRTAP1-1Q07627 177 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 ABHD18Q0P651 414 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 ARL13AQ5H913 290 aaPredicted RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TMEM81Q6P7N7 255 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 SLC30A9Q6PML9 568 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 RHOUQ7L0Q8 258 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TFAP2DQ7Z6R9 452 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 C17orf53Q8N3J3 647 aaPredicted RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TMEM217Q8N7C4 229 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 FRMD1Q8N878 549 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 NKAIN3Q8N8D7 197 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 SLC16A11Q8NCK7 471 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TNIP2Q8NFZ5 429 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 RP9Q8TA86 221 aaKnown RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 INTS12Q96CB8 462 aaKnown RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 CALML4Q96GE6 196 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 PBKQ96KB5 322 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 C5orf34Q96MH7 638 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 ZNF347Q96SE7 839 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 CINPQ9BW66 212 aaPredicted RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 FSD1LQ9BXM9 530 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 PDE7BQ9NP56 450 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 SH3GLB2Q9NR46 395 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TBCCD1Q9NVR7 557 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 TMEM248Q9NWD8 314 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 PARPBPQ9NWS1 579 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 UPB1Q9UBR1 384 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 CTNNAL1Q9UBT7 734 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 INTS6Q9UL03 887 aaKnown RBP3.9□□□□□ -1.79
CLCC1-209ENST00000482889 ADAMTS5Q9UNA0 930 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 SNX8Q9Y5X2 465 aa3.9□□□□□ -1.79
CLCC1-209ENST00000482889 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 PIPSLA2A3N6 862 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 C3orf70A6NLC5 250 aaPredicted RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 LINC00473A8K010 186 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 SH2B2O14492 632 aaPredicted RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 ADAM20O43506 726 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 CEP104O60308 925 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 CNTN5O94779 1100 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 EIF2S1P05198 315 aaKnown RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 GALTP07902 379 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 SELLP14151 372 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 MATN1P21941 496 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 VPS41P49754 854 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 ADPRHP54922 357 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 CYP4F2P78329 520 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 ROR1Q01973 937 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 DMWDQ09019 674 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 CHAF1BQ13112 559 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 MFSD13AQ14CX5 517 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 LSM12Q3MHD2 195 aaKnown RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 GXYLT1Q4G148 440 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 CDC73Q6P1J9 531 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 KLHL35Q6PF15 583 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 NAPRTQ6XQN6 538 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 ZNF551Q7Z340 670 aaPredicted RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 BCDIN3DQ7Z5W3 292 aaKnown RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 GALNT7Q86SF2 657 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 ENDOVQ8N8Q3 282 aaKnown RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 TMEM116Q8NCL8 245 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 Q8NFD4 153 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 SLC25A43Q8WUT9 341 aaPredicted RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 TBC1D5Q92609 795 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 PLEKHG4BQ96PX9 1271 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 MMS19Q96T76 1030 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 ALG8Q9BVK2 526 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 ZNF341Q9BYN7 854 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 IKZF4Q9H2S9 585 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 SYNCQ9H7C4 482 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 SFXN1Q9H9B4 322 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 Q9N2J8 555 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 SLC2A4RGQ9NR83 387 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 C20orf141Q9NUB4 165 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 ASNSD1Q9NWL6 643 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 TESQ9UGI8 421 aaKnown RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 FZD1Q9UP38 647 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 OSGIN2Q9Y236 505 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 HEMK1Q9Y5R4 338 aaPredicted RBP3.89□□□□□ -1.79
CLCC1-209ENST00000482889 LYVE1Q9Y5Y7 322 aa3.89□□□□□ -1.79
CLCC1-209ENST00000482889 TCRBV5S1A1TA0A578 114 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms