RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 INO80DQ53TQ3 878 aaPredicted RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 RALGPS1Q5JS13 557 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 HABP4Q5JVS0 413 aaKnown RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 CXorf57Q6NSI4 855 aaKnown RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 RETSATQ6NUM9 610 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 NUDT18Q6ZVK8 323 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 SUGP1Q8IWZ8 645 aaKnown RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 CFAP52Q8N1V2 620 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 CPA6Q8N4T0 437 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 TEX26Q8N6G2 289 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.39□□□□□ -0.75
USP39-215ENST00000481409 FAM71DQ8N9W8 422 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 LRRN4CLQ8ND94 238 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 WFIKKN2Q8TEU8 576 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 MYADMQ96S97 322 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 LGMNQ99538 433 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 IL12RB2Q99665 862 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 FAM83CQ9BQN1 747 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 RHOXF2Q9BQY4 288 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 APOL5Q9BWW9 433 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 PHF7Q9BWX1 381 aaPredicted RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 BBS2Q9BXC9 721 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 SMG9Q9H0W8 520 aaKnown RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 NOL6Q9H6R4 1146 aaKnown RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 ANKZF1Q9H8Y5 726 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 SP110Q9HB58 689 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 EPB41L5Q9HCM4 733 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 TRPV5Q9NQA5 729 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 ARGLU1Q9NWB6 273 aaPredicted RBP10.39□□□□□ -0.75
USP39-215ENST00000481409 IGSF9Q9P2J2 1179 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 ASIC3Q9UHC3 531 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 FBXO10Q9UK96 956 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 SLC27A6Q9Y2P4 619 aa10.39□□□□□ -0.75
USP39-215ENST00000481409 DOCK8Q8NF50 2099 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 CCDC151A5D8V7 595 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 RNF103O00237 685 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 DNALI1O14645 258 aaPredicted RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 TIMM44O43615 452 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 TSPAN3O60637 253 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 NEBLO76041 1014 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 IFNB1P01574 187 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 ADH5P11766 374 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 TYRP14679 529 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 ADCY8P40145 1251 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 MAGEA6P43360 314 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 SARNPP82979 210 aaKnown RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 CBLBQ13191 982 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 MORF4L2Q15014 288 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 ANKRD20A2Q5SQ80 823 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 LY6G5CQ5SRR4 150 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 ANKRD20A1Q5TYW2 823 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 MARC1Q5VT66 337 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 ANKRD20A3Q5VUR7 823 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 ARMC3Q5W041 872 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 IL31Q6EBC2 164 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 RHBDF2Q6PJF5 856 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 VITQ6UXI7 678 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 PPP1R21Q6ZMI0 780 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 ARHGEF18Q6ZSZ5 1173 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 TPGS1Q6ZTW0 290 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 KIAA0907Q7Z7F0 614 aaPredicted RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 AHI1Q8N157 1196 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 CARNMT1Q8N4J0 409 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 DEFB123Q8N688 67 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 HNRNPLLQ8WVV9 542 aaKnown RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 MYLIPQ8WY64 445 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 MYEOVQ96EZ4 313 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 HMCESQ96FZ2 354 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 CELF6Q96J87 481 aaKnown RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 TEKT5Q96M29 485 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 FAM161BQ96MY7 647 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 FEM1AQ9BSK4 669 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 TRMT61BQ9BVS5 477 aaKnown RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 MUC3BQ9H195 1237 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 PDFQ9HBH1 243 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 ATP13A1Q9HD20 1204 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 EIF2B3Q9NR50 452 aaKnown RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 NDFIP2Q9NV92 336 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 MTRF1LQ9UGC7 380 aaKnown RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 DMGDHQ9UI17 866 aaKnown RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 TPX2Q9ULW0 747 aaKnown RBP10.38□□□□□ -0.75
USP39-215ENST00000481409 SHOC2Q9UQ13 582 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 MFHAS1Q9Y4C4 1052 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 OR51B4Q9Y5P0 310 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 NUP205Q92621 2012 aa10.38□□□□□ -0.75
USP39-215ENST00000481409 TRIOBPQ9H2D6 2365 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 UQCRHLA0A096LP55 91 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 NEDD8-MDP1E9PL57 170 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 DYNC1I1O14576 645 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 ANXA9O76027 345 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 SEC31AO94979 1220 aaKnown RBP10.37□□□□□ -0.75
USP39-215ENST00000481409 ASLP04424 464 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 CYP17A1P05093 508 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 UQCRHP07919 91 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 VAV1P15498 845 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 PTPN3P26045 913 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 RPL22P35268 128 aaKnown RBP10.37□□□□□ -0.75
USP39-215ENST00000481409 VIPR2P41587 438 aa10.37□□□□□ -0.75
USP39-215ENST00000481409 IRAK1P51617 712 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms