RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 SLC39A13Q96H72 371 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 CCNL2Q96S94 520 aaPredicted RBP13.76□□□□□ -0.21
NDC1-202ENST00000480952 MIS12Q9H081 205 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 NCKIPSDQ9NZQ3 722 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 NAALADL1Q9UQQ1 740 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 ENTPD2Q9Y5L3 495 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 U3KQA8 63 aa13.76□□□□□ -0.21
NDC1-202ENST00000480952 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 MCF2LO15068 1137 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 ALOX15BO15296 676 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 LZTS3O60299 673 aaPredicted RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 TNFSF15O95150 251 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 FYNP06241 537 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 HNRNPA2B1P22626 353 aaKnown RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 CLDN2P57739 230 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 TAS2R38P59533 333 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 HNRNPKP61978 463 aaKnown RBP eCLIP13.75□□□□□ -0.21
NDC1-202ENST00000480952 CLN3Q13286 438 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 ZNF177Q13360 481 aaPredicted RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 NNTQ13423 1086 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 DLG2Q15700 870 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 ZNF284Q2VY69 593 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 FOXD4L5Q5VV16 416 aaPredicted RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 ZCCHC8Q6NZY4 707 aaKnown RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 NEK5Q6P3R8 708 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 ATG14Q6ZNE5 492 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 RBM44Q6ZP01 1051 aaKnown RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 Q6ZSR6 202 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 EFL1Q7Z2Z2 1120 aaKnown RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 HORMAD1Q86X24 394 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 TPCN2Q8NHX9 752 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 FOXD4L4Q8WXT5 416 aaPredicted RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 ERCC4Q92889 916 aaPredicted RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 ARRDC3Q96B67 414 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 PRR11Q96HE9 360 aaPredicted RBP13.75□□□□□ -0.21
NDC1-202ENST00000480952 NOX5Q96PH1 765 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 SLC25A13Q9UJS0 675 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 COL12A1Q99715 3063 aa13.75□□□□□ -0.21
NDC1-202ENST00000480952 CDRT15L2A8MXV6 281 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 F5H5T6 163 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 M0QYV0 167 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 ATP9BO43861 1147 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 GJB6O95452 261 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 MYL1P05976 194 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 PLK1P53350 603 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 OXCT1P55809 520 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
NDC1-202ENST00000480952 ZC3H12AQ5D1E8 599 aaKnown RBP13.74□□□□□ -0.21
NDC1-202ENST00000480952 PIP5KL1Q5T9C9 394 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 GUSBP11Q6P575 273 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 XKR5Q6UX68 686 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 Q6ZVU0 165 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 USP53Q70EK8 1073 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 TAC4Q86UU9 113 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 CIR1Q86X95 450 aaPredicted RBP13.74□□□□□ -0.21
NDC1-202ENST00000480952 DCP2Q8IU60 420 aaKnown RBP13.74□□□□□ -0.21
NDC1-202ENST00000480952 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
NDC1-202ENST00000480952 SLC22A18ASQ8N1D0 253 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 WDR36Q8NI36 951 aaKnown RBP13.74□□□□□ -0.21
NDC1-202ENST00000480952 TFAP2BQ92481 460 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 RNF34Q969K3 372 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 FAM149B1Q96BN6 582 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 BTN2A3PQ96KV6 586 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 HSFY1Q96LI6 401 aa13.74□□□□□ -0.21
NDC1-202ENST00000480952 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
NDC1-202ENST00000480952 PMS2P1A4D2B8 440 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 KPNA3O00505 521 aaPredicted RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 TERTO14746 1132 aaKnown RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 PCDH8O95206 1070 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 PAEPP09466 180 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 MLLT3P42568 568 aaPredicted RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 VASPP50552 380 aaPredicted RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 NFKB2Q00653 900 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 LRMPQ12912 555 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 NR0B2Q15466 257 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 CNGA2Q16280 664 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 LINC00303Q3SY05 128 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 CBWD6Q4V339 395 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 DCAF17Q5H9S7 520 aaPredicted RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 CBWD3Q5JTY5 395 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 CBWD5Q5RIA9 395 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 TCERG1LQ5VWI1 586 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 TMEM270Q6UE05 265 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 CRTC1Q6UUV9 634 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 ZNF574Q6ZN55 896 aaPredicted RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 GCNT7Q6ZNI0 430 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 PTAR1Q7Z6K3 402 aaPredicted RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 ABI3BPQ7Z7G0 1075 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 CLEC14AQ86T13 490 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 FAM174AQ8TBP5 190 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 DYRK4Q9NR20 520 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 SLC12A6Q9UHW9 1150 aa13.73□□□□□ -0.21
NDC1-202ENST00000480952 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
NDC1-202ENST00000480952 EME2A4GXA9 379 aaPredicted RBP13.72□□□□□ -0.21
NDC1-202ENST00000480952 A6NNZ2 444 aa13.72□□□□□ -0.21
NDC1-202ENST00000480952 H3BM21 787 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms