RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 IGHV1OR15-9A0A0B4J2B8 117 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 MACROD2A1Z1Q3 448 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 TYW5A2RUC4 315 aaKnown RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 UPK3BL1B0FP48 263 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 UPK3BL2E5RIL1 263 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 E9PAM4 449 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 FAM72CH0Y354 149 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 TAF4O00268 1085 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 GFRA2O00451 464 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 PJA2O43164 708 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 CREB3O43889 395 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 GJB3O75712 270 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 MTA2O94776 668 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 ALDH1A2O94788 518 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 CD59P13987 128 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 NDUFV2P19404 249 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 IL1R2P27930 398 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 HOXD9P28356 352 aaPredicted RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 TAS2R40P59535 323 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 CCDC173Q0VFZ6 552 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 KIF5AQ12840 1032 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 LMAN2Q12907 356 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 CA9Q16790 459 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 SMTNL2Q2TAL5 461 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 EFHC2Q5JST6 749 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 KCNT1Q5JUK3 1230 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 SPDYCQ5MJ68 293 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 FAM72AQ5TYM5 149 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 LYSMD4Q5XG99 296 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 TXNRD3NBQ6F5E7 133 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 FAM72DQ6L9T8 149 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 RWDD4Q6NW29 188 aaKnown RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 LRRC31Q6UY01 552 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 FAM72BQ86X60 149 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 CARNMT1Q8N4J0 409 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 ZNF513Q8N8E2 541 aaPredicted RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 NIPA2Q8N8Q9 360 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 HJURPQ8NCD3 748 aaPredicted RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 XPO6Q96QU8 1125 aaKnown RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 HAPLN3Q96S86 360 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 SNRNP25Q9BV90 132 aaKnown RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 DHX35Q9H5Z1 703 aaKnown RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 MPP6Q9NZW5 540 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 MARK1Q9P0L2 795 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 BCCIPQ9P287 314 aaKnown RBP eCLIP9.32□□□□□ -0.92
VCP-206ENST00000480327 OR12D3Q9UGF7 316 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 AP4E1Q9UPM8 1137 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 STARD13Q9Y3M8 1113 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 NEUROG3Q9Y4Z2 214 aa9.32□□□□□ -0.92
VCP-206ENST00000480327 NYNRINQ9P2P1 1898 aaKnown RBP9.32□□□□□ -0.92
VCP-206ENST00000480327 A0A0A6YYK5 440 aaPredicted RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 FAM221BA6H8Z2 402 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 TBC1D3BA6NDS4 549 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 H0Y626 953 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 MAP3K13O43283 966 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 BUB1BO60566 1050 aaPredicted RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 CNTN5O94779 1100 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 MOCS3O95396 460 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 PENKP01210 267 aaPredicted RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 SERPINF2P08697 491 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 CCDC175P0C221 793 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 CISD3P0C7P0 127 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 HOXB2P14652 356 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 PCK1P35558 622 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 ARHGAP25P42331 645 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 RPL6Q02878 288 aaKnown RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 ZNF33AQ06730 810 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 MTA1Q13330 715 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 ACAP1Q15027 740 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 ATP13A4Q4VNC1 1196 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 ALFQ53S48 1182 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 PPP6R3Q5H9R7 873 aaPredicted RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 RABGAP1LQ5R372 815 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 ZFYVE27Q5T4F4 411 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 ERMARDQ5T6L9 678 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 GRAMD4Q6IC98 578 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 CYP4V2Q6ZWL3 525 aaPredicted RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 TFAP2DQ7Z6R9 452 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 DAAM2Q86T65 1068 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 MFN1Q8IWA4 741 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 PGBD3Q8N328 593 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 TPCN2Q8NHX9 752 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 WFDC5Q8TCV5 224 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 NTAN1Q96AB6 310 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 SPACA7Q96KW9 195 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 C1orf74Q96LT6 269 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 CAMK1GQ96NX5 476 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 PPP1R9BQ96SB3 815 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 KCTD15Q96SI1 283 aaPredicted RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 GABRG3Q99928 467 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 NUSAP1Q9BXS6 441 aaKnown RBP9.31□□□□□ -0.92
VCP-206ENST00000480327 LZTFL1Q9NQ48 299 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 KLHL11Q9NVR0 708 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 TMEM51Q9NW97 253 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 DEC1Q9P2X7 70 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 GUCA1BQ9UMX6 200 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 SLC6A14Q9UN76 642 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 RAD54BQ9Y620 910 aa9.31□□□□□ -0.92
VCP-206ENST00000480327 PLXNA2O75051 1894 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms