RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PLXND1Q9Y4D7 1925 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 CCDC66A2RUB6 948 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 TYW5A2RUC4 315 aaKnown RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 F5H5T6 163 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 PRPSAP2O60256 369 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 BUB1BO60566 1050 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 PAGE1O75459 146 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 ZNF189O75820 626 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 CYBBP04839 570 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 SERPINF2P08697 491 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 TFE3P19532 575 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 TACR2P21452 398 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 CTNNA2P26232 953 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 HOXD9P28356 352 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 CTNNA1P35221 906 aaKnown RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 ETFBP38117 255 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 DHPSP49366 369 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 ARSEP51690 589 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 PLK1P53350 603 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 CDH4P55283 916 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 COPS2P61201 443 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 C15orf59Q2T9L4 293 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 TRIM61Q5EBN2 209 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 EFHC2Q5JST6 749 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 ERMARDQ5T6L9 678 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 EGFLAMQ63HQ2 1017 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 KIAA1211LQ6NV74 962 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 DBX2Q6ZNG2 339 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 TRMT11Q7Z4G4 463 aaKnown RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 NLRP14Q86W24 1093 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 LRRC49Q8IUZ0 686 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 KATNAL2Q8IYT4 538 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 LZTR1Q8N653 840 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 ZNF513Q8N8E2 541 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 ACRBPQ8NEB7 543 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 WFIKKN2Q8TEU8 576 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 LMLNQ96KR4 655 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 PRICKLE1Q96MT3 831 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 EPAS1Q99814 870 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 TRIM7Q9C029 511 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 TMEM248Q9NWD8 314 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 DDX56Q9NY93 547 aaKnown RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 SALL4Q9UJQ4 1053 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 SLC6A14Q9UN76 642 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 PPP2R2CQ9Y2T4 447 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 RAD54BQ9Y620 910 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 HS3ST4Q9Y661 456 aa9.16□□□□□ -0.94
DDX56-211ENST00000479602 MUC22E2RYF6 1773 aaPredicted RBP9.16□□□□□ -0.94
DDX56-211ENST00000479602 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 TCRBV21S2A2A0A5A6 115 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 ZNF217O75362 1048 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 IGLV3-19P01714 112 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 CD59P13987 128 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 TYRP14679 529 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 RHOQP17081 205 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 ENGP17813 658 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 SLC6A4P31645 630 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 YBEYP58557 167 aaPredicted RBP9.15□□□□□ -0.94
DDX56-211ENST00000479602 RNASE9P60153 205 aaKnown RBP9.15□□□□□ -0.94
DDX56-211ENST00000479602 ATP11AP98196 1134 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 KDSRQ06136 332 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 ZNF33AQ06730 810 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 AUHQ13825 339 aaKnown RBP9.15□□□□□ -0.94
DDX56-211ENST00000479602 PPP2R5EQ16537 467 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 DUOXA1Q1HG43 343 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 LYSMD4Q5XG99 296 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 FBXL22Q6P050 247 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 UNQ6494/PRO21346Q6UXR6 183 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 SLC36A4Q6YBV0 504 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 KIAA1328Q86T90 577 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 FAM131BQ86XD5 332 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 DENND1CQ8IV53 801 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 MAP7D3Q8IWC1 876 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 RHOT1Q8IXI2 618 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 UMODL1-AS1Q8N2C9 162 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 C1orf216Q8TAB5 229 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 FIBINQ8TAL6 211 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 CEP76Q8TAP6 659 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 HMGB4Q8WW32 186 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 DNASE2BQ8WZ79 361 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 MRGPRX1Q96LB2 322 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 XPO6Q96QU8 1125 aaKnown RBP9.15□□□□□ -0.94
DDX56-211ENST00000479602 SNRNP25Q9BV90 132 aaKnown RBP9.15□□□□□ -0.94
DDX56-211ENST00000479602 ANLNQ9NQW6 1124 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 ITM2CQ9NQX7 267 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 DNAAF2Q9NVR5 837 aaKnown RBP9.15□□□□□ -0.94
DDX56-211ENST00000479602 OR12D3Q9UGF7 316 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 NUDT5Q9UKK9 219 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 AP4E1Q9UPM8 1137 aa9.15□□□□□ -0.94
DDX56-211ENST00000479602 ILVBLA1L0T0 632 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 GRID2IPA4D2P6 1211 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 C10orf142B7Z368 130 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 WASH3PC4AMC7 463 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 E9PAM4 449 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 ARHGAP33O14559 1287 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 TIMM44O43615 452 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 LRIG2O94898 1065 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 LUC7L3O95232 432 aaKnown RBP9.14□□□□□ -0.95
DDX56-211ENST00000479602 GJB6O95452 261 aa9.14□□□□□ -0.95
DDX56-211ENST00000479602 TUBB4AP04350 444 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms