RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ZNF471Q9BX82 626 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 COMMD4Q9H0A8 199 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MMADHCQ9H3L0 296 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 C14orf166Q9Y224 244 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 LEMD3Q9Y2U8 911 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CC2D2AQ9P2K1 1620 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MYH6P13533 1939 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 VILLO15195 856 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SEC14L5O43304 696 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 IRF2P14316 349 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 GRIA1P42261 906 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 RPS9P46781 194 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 ALDH7A1P49419 539 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 EPHB3P54753 998 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MYBPC1Q00872 1141 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PRKG2Q13237 762 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PTPROQ16827 1216 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZDHHC20Q5W0Z9 365 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 NAPRTQ6XQN6 538 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 DCDC5Q6ZRR9 648 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SPATA22Q8NHS9 363 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 C1orf216Q8TAB5 229 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PLEKHO2Q8TD55 490 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 METTL21AQ8WXB1 218 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MRPS31Q92665 395 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 SPON2Q9BUD6 331 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 JMJD4Q9H9V9 463 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 KCNH7Q9NS40 1196 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 FAM207AQ9NSI2 230 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 ZNF224Q9NZL3 707 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 COPS7AQ9UBW8 275 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CNOT8Q9UFF9 292 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 FEM1BQ9UK73 627 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 IFT140Q96RY7 1462 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MYH3P11055 1940 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 NT5C1B-RDH14C9J2C7 533 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 KCNK1O00180 336 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ANXA3P12429 323 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CTSEP14091 401 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TAS2R50P59544 299 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 NR1I3Q14994 352 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CES5AQ6NT32 575 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 GIMAP6Q6P9H5 292 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CCNI2Q6ZMN8 369 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 CREB3L2Q70SY1 520 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TRMT11Q7Z4G4 463 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 UBE2Q1Q7Z7E8 422 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PACS2Q86VP3 889 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZZZ3Q8IYH5 903 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 NLGN1Q8N2Q7 840 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 KLHL23Q8NBE8 558 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PCDH19Q8TAB3 1148 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ATG4AQ8WYN0 398 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 EZH1Q92800 747 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 RFKQ969G6 155 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ELMO3Q96BJ8 720 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TEX13BQ9BXU2 312 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SLC35C2Q9NQQ7 365 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ENTPD7Q9NQZ7 604 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SDHAF2Q9NX18 166 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SIX4Q9UIU6 781 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 EPN1Q9Y6I3 576 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 THOC2Q8NI27 1593 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 GTPBP1O00178 669 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 TSC22D2O75157 780 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CYP3A4P08684 503 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 GPR15P49685 360 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CYP4F2P78329 520 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CYP4F3Q08477 520 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 MLC1Q15049 377 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 MPPED2Q15777 294 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ARRDC4Q8NCT1 418 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 C1orf131Q8NDD1 294 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 BPIFB6Q8NFQ5 453 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZSWIM3Q96MP5 696 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 TGS1Q96RS0 853 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 APOL5Q9BWW9 433 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 RAVER2Q9HCJ3 691 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 MRPS17Q9Y2R5 130 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 PCYT1BQ9Y5K3 369 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 ASXL1Q8IXJ9 1541 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 FGD6Q6ZV73 1430 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 KIAA0232Q92628 1395 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ZNF891A8MT65 544 aaPredicted RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 USP17L12C9JPN9 530 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 USP17L21D6R901 530 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PMPCBO75439 489 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 RAB36O95755 333 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 ANPEPP15144 967 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CDC42P60953 191 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 AADACL4Q5VUY2 407 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 STOML3Q8TAV4 291 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CORO2AQ92828 525 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 EBNA1BP2Q99848 306 aaKnown RBP5.5□□□□□ -1.53
USF3-202ENST00000478658 SHCBP1LQ9BZQ2 653 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 PDGFCQ9NRA1 345 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 KANSL3Q9P2N6 904 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 MSRAQ9UJ68 235 aa5.5□□□□□ -1.53
USF3-202ENST00000478658 CCNL1Q9UK58 526 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms