RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 XRCC4Q13426 336 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 GPR162Q16538 588 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 IGSF11Q5DX21 431 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 FAM47CQ5HY64 1035 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 HFE2Q6ZVN8 426 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 POLNQ7Z5Q5 900 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 NIPA2Q8N8Q9 360 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 CCHCR1Q8TD31 782 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 DENND1AQ8TEH3 1009 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 DCAKDQ8WVC6 231 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 SEPT8Q92599 483 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 EDEM1Q92611 657 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 ZNF566Q969W8 418 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 CATSPER2Q96P56 530 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 CDH19Q9H159 772 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 ASB7Q9H672 318 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 USP29Q9HBJ7 922 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 NDFIP2Q9NV92 336 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 NUDT5Q9UKK9 219 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 KCNH4Q9UQ05 1017 aa6.21□□□□□ -1.42
SH3D19-207ENST00000478503 LOXHD1Q8IVV2 1947 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 FAM237BA0A1B0GVD1 139 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SRRM3A6NNA2 597 aaPredicted RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 CHUKO15111 745 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 GAS2O43903 313 aaKnown RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 TYROBPO43914 113 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SMIM10L2AP0DMW4 78 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SMIM10L2BP0DMW5 78 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 ALOX15P16050 662 aaPredicted RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 ENDOUP21128 410 aaKnown RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 MAPK10P53779 464 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 YWHAZP63104 245 aaKnown RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 OLR1P78380 273 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SLC6A3Q01959 620 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 RCN2Q14257 317 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 NOMO1Q15155 1222 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 ZNF792Q3KQV3 632 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 MAP3K21Q5TCX8 1036 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SYPL2Q5VXT5 272 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 THOC7Q6I9Y2 204 aaKnown RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 LCLAT1Q6UWP7 414 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 BEND5Q7L4P6 421 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 EPHX4Q8IUS5 362 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 DEFB106AQ8N104 65 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 PNPLA1Q8N8W4 532 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 TTC13Q8NBP0 860 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 PPTC7Q8NI37 304 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 KCNK16Q96T55 309 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 CYTH2Q99418 400 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 PTPN18Q99952 460 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SNX25Q9H3E2 840 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 ACSS3Q9H6R3 686 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 GBA2Q9HCG7 927 aaPredicted RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 HPF1Q9NWY4 346 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 WDR35Q9P2L0 1181 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 RIMKLBQ9ULI2 386 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 PPT2Q9UMR5 302 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 AP4E1Q9UPM8 1137 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 DOCK3Q8IZD9 2030 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 TRIP11Q15643 1979 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SMIM28A0A1B0GU29 152 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SERTM1A2A2V5 107 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 WDR27A2RRH5 827 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 CACNB4O00305 520 aaPredicted RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 MAGEB2O15479 319 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SMPD2O60906 423 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 OAS1P00973 400 aaKnown RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 AMHP03971 560 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 CSH1P0DML2 217 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 CSH2P0DML3 217 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 ALAS2P22557 587 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 HSD17B2P37059 387 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 SLC26A2P50443 739 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 DGKDQ16760 1214 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 EFHC2Q5JST6 749 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 WSCD1Q658N2 575 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 PPP1R2P3Q6NXS1 205 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 NLRP9Q7RTR0 991 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 MAP7D3Q8IWC1 876 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 EFCAB3Q8N7B9 438 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 MAML3Q96JK9 1138 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 PPP1R36Q96LQ0 422 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 PAAF1Q9BRP4 392 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 HERC2P3Q9BVR0 1158 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 CCDC134Q9H6E4 229 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 MANSC1Q9H8J5 431 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 RXFP1Q9HBX9 757 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 WDR6Q9NNW5 1121 aaKnown RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.2□□□□□ -1.421e-7■□□□□ 8.7
SH3D19-207ENST00000478503 HEY2Q9UBP5 337 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 GGA2Q9UJY4 613 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 ARID2Q68CP9 1835 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 EDF1O60869 148 aaKnown RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 ENTPD5O75356 428 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 TSPAN9O75954 239 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 TBX18O95935 607 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 XPAP23025 273 aaPredicted RBP6.2□□□□□ -1.42
SH3D19-207ENST00000478503 S100A5P33763 92 aa6.2□□□□□ -1.42
SH3D19-207ENST00000478503 NUBP1P53384 320 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms