RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 PYROXD1Q8WU10 500 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 TRIM62Q9BVG3 475 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 MLXIPLQ9NP71 852 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 SMYD2Q9NRG4 433 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 PLK2Q9NYY3 685 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 AGO1Q9UL18 857 aaKnown RBP12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 CCL26Q9Y258 94 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 TEX264Q9Y6I9 313 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 ATG2AQ2TAZ0 1938 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 CFAP69A5D8W1 941 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 E7ESA3 106 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 E7EVH7 732 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 CHADO15335 359 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 PEX11BO96011 259 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 HLA-DQB2P05538 268 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 MBL2P11226 248 aaPredicted RBP12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 MGAT1P26572 445 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 MAGEA10P43363 369 aaPredicted RBP12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 EPHB3P54753 998 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 SLC10A7Q0GE19 358 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 LRRC31Q6UY01 552 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 RNF135Q8IUD6 432 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 C12orf76Q8N812 135 aaPredicted RBP12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 MRPL43Q8N983 215 aaKnown RBP12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 WFDC5Q8TCV5 224 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 CAPS2Q9BXY5 557 aa12.09□□□□□ -0.47
TNRC6A-206ENST00000477487 TRIOO75962 3097 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 EPOPA6NHQ4 379 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 HACD1B0YJ81 288 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 SMAD3P84022 425 aaKnown RBP12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 SEMA5AQ13591 1074 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 SLC5A9Q2M3M2 681 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 ATPAF2Q8N5M1 289 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 ATP6V0D2Q8N8Y2 350 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 SIGLEC10Q96LC7 697 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 NSMCE3Q96MG7 304 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 ZYG11BQ9C0D3 744 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 C12orf65Q9H3J6 166 aaKnown RBP12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 FNIP2Q9P278 1114 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 CLEC4EQ9ULY5 219 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 CPQQ9Y646 472 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 MAD1L1Q9Y6D9 718 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 RASA4BC9J798 803 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 H3BNC9 293 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 RASA4O43374 803 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 ACSL4O60488 711 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 GREM1O60565 184 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 CCNB1P14635 433 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 NAT1P18440 290 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 GNGT1P63211 74 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 VEPH1Q14D04 833 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 TEX44Q53QW1 395 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 FSCBQ5H9T9 825 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 AFMIDQ63HM1 303 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 HOOK3Q86VS8 718 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 PDIK1LQ8N165 341 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 PABPC5Q96DU9 382 aaKnown RBP12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 C1orf74Q96LT6 269 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 OLA1Q9NTK5 396 aaKnown RBP12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 RSPH14Q9UHP6 348 aa12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 IPO11Q9UI26 975 aaKnown RBP12.08□□□□□ -0.48
TNRC6A-206ENST00000477487 IGLV3-10A0A075B6K4 115 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 MUSKO15146 869 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 SHOX2O60902 331 aaPredicted RBP12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 HDCP19113 662 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 NR1D1P20393 614 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 OR1E1P30953 314 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 CHRNA4P43681 627 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 CLCN4P51793 760 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 SF3A3Q12874 501 aaKnown RBP eCLIP12.07□□□□□ -0.486e-10■■■□□ 18.5
TNRC6A-206ENST00000477487 CBX2Q14781 532 aaPredicted RBP12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 TMED2Q15363 201 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 CERCAMQ5T4B2 595 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 COL13A1Q5TAT6 717 aaPredicted RBP12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 SNX30Q5VWJ9 437 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 PCGF5Q86SE9 256 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 PGBD5Q8N414 524 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 ZNF778Q96MU6 729 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 XPO6Q96QU8 1125 aaKnown RBP12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 KLF6Q99612 283 aaPredicted RBP12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 APOL5Q9BWW9 433 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 OXCT2Q9BYC2 517 aaPredicted RBP12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 CATSPERBQ9H7T0 1116 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 TLR9Q9NR96 1032 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 SYBUQ9NX95 663 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 MTCL1Q9Y4B5 1905 aaKnown RBP12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 A0A1W2PPM1 405 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 TCRBV9S1A1TA0A576 114 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 ARHGAP42A6NI28 874 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 HMGB1P1B2RPK0 211 aaPredicted RBP12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 AGTP01019 485 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 C1QAP02745 245 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 GMPRP36959 345 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 MPP2Q14168 576 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 FOXR1Q6PIV2 292 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 EXOC3L1Q86VI1 746 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 RELL1Q8IUW5 271 aa12.07□□□□□ -0.48
TNRC6A-206ENST00000477487 ARNTL2Q8WYA1 636 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms