RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 RAB24Q969Q5 203 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SYTL4Q96C24 671 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 GIMAP5Q96F15 307 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF668Q96K58 619 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 FCRL2Q96LA5 508 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 CNOT6LQ96LI5 555 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 ZFP42Q96MM3 310 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CAMK1GQ96NX5 476 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PRAM1Q96QH2 718 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 MED15Q96RN5 788 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 FIZ1Q96SL8 496 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 KCNK16Q96T55 309 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TUBB2BQ9BVA1 445 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CCDC106Q9BWC9 280 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PHF7Q9BWX1 381 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 FOXP3Q9BZS1 431 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 ANKRD2Q9GZV1 360 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 AP5M1Q9H0R1 490 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 STMN4Q9H169 189 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 DUSP15Q9H1R2 295 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 NELFAQ9H3P2 528 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 RIBC2Q9H4K1 309 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 STN1Q9H668 368 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 SYNPO2LQ9H987 977 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PLEKHA2Q9HB19 425 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SEMA4BQ9NPR2 832 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 SLAMF7Q9NQ25 335 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TRPV5Q9NQA5 729 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PCDHB16Q9NRJ7 776 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 INTS13Q9NVM9 706 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 NMRK1Q9NWW6 199 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PIM2Q9P1W9 311 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 BTBD7Q9P203 1132 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 ARMCX3Q9UH62 379 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 CDH22Q9UJ99 828 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CDH7Q9ULB5 785 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 OSGIN2Q9Y236 505 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 RPH3AQ9Y2J0 694 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 JRKLQ9Y4A0 524 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TELO2Q9Y4R8 837 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CRB1P82279 1406 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 RBBP6Q7Z6E9 1792 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 TMEM2Q9UHN6 1383 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ARHGAP5Q13017 1502 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 RIF1Q5UIP0 2472 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SALL3Q9BXA9 1300 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PQ45 241 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PQY0 241 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PR48 441 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CTAGE15A4D2H0 777 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 OOEPA6NGQ2 149 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 LRRIQ4A6NIV6 560 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 OR6C76A6NM76 312 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 NEURL1BA8MQ27 555 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 GNAT3A8MTJ3 354 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 HNRNPCL2B2RXH8 293 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TMEM233B4DJY2 109 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 H0YCG3 227 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 L7N2F9 121 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 RASGRF2O14827 1237 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 POLR3GO15318 223 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 MAGEB3O15480 346 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TGFB1I1O43294 461 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ADCY6O43306 1168 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TLR2O60603 784 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PRAMEF4O60810 478 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PPP1R11O60927 126 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 FKTNO75072 461 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 UNC5CO95185 931 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 LETM1O95202 739 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 IFNB1P01574 187 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 AMY1AP04745 511 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CD1AP06126 327 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 RB1P06400 928 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CTAGE8P0CG41 777 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CCDC192P0DO97 292 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 NEFHP12036 1026 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 GZMAP12544 262 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PRG2P13727 222 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 FAHP16930 419 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF8P17098 575 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 RAB6AP20340 208 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CRHR1P34998 444 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CPOXP36551 454 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SREBF1P36956 1147 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 MAGEA10P43363 369 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 RAB28P51157 221 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 MFAP4P55083 255 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 KIAA1024LP59773 190 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ACTR1AP61163 376 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 UFM1P61960 85 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 OLR1P78380 273 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PRR20EP86478 221 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PRR20CP86479 221 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PRR20DP86480 221 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PRR20BP86481 221 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PRR20AP86496 221 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PRKCEQ02156 737 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms