RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TNIP2Q8NFZ5 429 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 METTL6Q8TCB7 284 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 IGFBPL1Q8WX77 278 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 CNOT9Q92600 299 aaKnown RBP6.45□□□□□ -1.38
VPS50-212ENST00000476413 KRTAP4-2Q9BYR5 136 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 BRF2Q9HAW0 419 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 TAS2R10Q9NYW0 307 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 TBC1D14Q9P2M4 693 aa6.45□□□□□ -1.38
VPS50-212ENST00000476413 FBXO2Q9UK22 296 aaPredicted RBP6.45□□□□□ -1.38
VPS50-212ENST00000476413 PI4KAP2A4QPH2 592 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 NPIPB15A6NHN6 443 aaPredicted RBP6.44□□□□□ -1.38
VPS50-212ENST00000476413 TSPAN4O14817 238 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 RAMP2O60895 175 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 PLAUP00749 431 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 CLEC3BP05452 202 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 UBL4AP11441 157 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 RPS6KB1P23443 525 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 UFM1P61960 85 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 VWA5B1Q5TIE3 1220 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 GGNQ86UU5 652 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 DIS3L2Q8IYB7 885 aaKnown RBP6.44□□□□□ -1.38
VPS50-212ENST00000476413 TMEM217Q8N7C4 229 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 PNLDC1Q8NA58 520 aaKnown RBP6.44□□□□□ -1.38
VPS50-212ENST00000476413 CREB3L4Q8TEY5 395 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 ASB2Q96Q27 587 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 TREX2Q9BQ50 279 aaPredicted RBP6.44□□□□□ -1.38
VPS50-212ENST00000476413 EFHD1Q9BUP0 239 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 CADM1Q9BY67 442 aaKnown RBP6.44□□□□□ -1.38
VPS50-212ENST00000476413 TMX4Q9H1E5 349 aaPredicted RBP6.44□□□□□ -1.38
VPS50-212ENST00000476413 KCND2Q9NZV8 630 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 ING1Q9UK53 422 aaPredicted RBP6.44□□□□□ -1.38
VPS50-212ENST00000476413 PIAS3Q9Y6X2 628 aa6.44□□□□□ -1.38
VPS50-212ENST00000476413 SLC22A23A1A5C7 686 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 A6NCN8 305 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 LRRC3CA6NJW4 275 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 FCGR2AP12318 317 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 CHMP24386 653 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 TACR3P29371 465 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 MAPK4P31152 587 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 EFNB1P98172 346 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 MTA1Q13330 715 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 RPE65Q16518 533 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 CERKLQ49MI3 558 aaPredicted RBP6.43□□□□□ -1.38
VPS50-212ENST00000476413 SLC9B1Q4ZJI4 515 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 ATF7IPQ6VMQ6 1270 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 B4GALNT4Q76KP1 1039 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 ARHGEF25Q86VW2 580 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 KLBQ86Z14 1044 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 ARL14EPQ8N8R7 260 aaPredicted RBP6.43□□□□□ -1.38
VPS50-212ENST00000476413 ZMIZ2Q8NF64 920 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 PIGKQ92643 395 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 KAT2AQ92830 837 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 C5orf34Q96MH7 638 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 VEZTQ9HBM0 779 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 NLKQ9UBE8 527 aa6.43□□□□□ -1.38
VPS50-212ENST00000476413 C17orf113A0A1B0GUU1 675 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 CXorf65A6NEN9 183 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 HBP1O60381 514 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 DOK2O60496 412 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 EIF5BO60841 1220 aaKnown RBP6.42□□□□□ -1.38
VPS50-212ENST00000476413 ICAM3P32942 547 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 EFNA5P52803 228 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 PROK1P58294 105 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 PGM5Q15124 567 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 PLK5Q496M5 336 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 C10orf76Q5T2E6 689 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 SPATA1Q5VX52 437 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 FAM205BPQ63HN1 556 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 FCRLBQ6BAA4 426 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 SUMO4Q6EEV6 95 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 C16orf54Q6UWD8 224 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 PXKQ7Z7A4 578 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 UEVLDQ8IX04 471 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 NGEFQ8N5V2 710 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.42□□□□□ -1.38
VPS50-212ENST00000476413 MAP4K1Q92918 833 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 SLC32A1Q9H598 525 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 PCDHB16Q9NRJ7 776 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 HSPB7Q9UBY9 170 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 MAFFQ9ULX9 164 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 ICKQ9UPZ9 632 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 SLC45A1Q9Y2W3 748 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 CLDN16Q9Y5I7 305 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 DMRT1Q9Y5R6 373 aa6.42□□□□□ -1.38
VPS50-212ENST00000476413 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 FSD2A1L4K1 749 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 TARSL2A2RTX5 802 aaKnown RBP6.41□□□□□ -1.38
VPS50-212ENST00000476413 OR6C68A6NDL8 312 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 PABPN1LA6NDY0 278 aaKnown RBP6.41□□□□□ -1.38
VPS50-212ENST00000476413 INPPL1O15357 1258 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 CEP104O60308 925 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 PTP4A3O75365 173 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 GFPT2O94808 682 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 MLYCDO95822 493 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 DDAH2O95865 285 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 ADAP00813 363 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 HLA-DQA2P01906 255 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 WNT1P04628 370 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 TUBA4AP68366 448 aa6.41□□□□□ -1.38
VPS50-212ENST00000476413 DPTQ07507 201 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms