RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 DESP17661 470 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 NNMTP40261 264 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 PTPN9P43378 593 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 CSNK1EP49674 416 aaKnown RBP16.63■□□□□ 0.25
COL1A1-205ENST00000476387 IRAK1P51617 712 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 C15orf59Q2T9L4 293 aaPredicted RBP16.63■□□□□ 0.25
COL1A1-205ENST00000476387 ARL13BQ3SXY8 428 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 KIAA0895LQ68EN5 471 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 ACAD10Q6JQN1 1059 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 CXorf57Q6NSI4 855 aaKnown RBP16.63■□□□□ 0.25
COL1A1-205ENST00000476387 LRSAM1Q6UWE0 723 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 STRADAQ7RTN6 431 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 BNIPLQ7Z465 357 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 RAB44Q7Z6P3 723 aaPredicted RBP16.63■□□□□ 0.25
COL1A1-205ENST00000476387 APCDD1Q8J025 514 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 GANCQ8TET4 914 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 HAPLN3Q96S86 360 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 MUC3BQ9H195 1237 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 ANLNQ9NQW6 1124 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 TM7SF3Q9NS93 570 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 ADAMTS1Q9UHI8 967 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 SLCO3A1Q9UIG8 710 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 PCOLCE2Q9UKZ9 415 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 FZD4Q9ULV1 537 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 TPX2Q9ULW0 747 aaKnown RBP16.63■□□□□ 0.25
COL1A1-205ENST00000476387 SLCO1B1Q9Y6L6 691 aa16.63■□□□□ 0.25
COL1A1-205ENST00000476387 E9PAM4 449 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 I6L893 689 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-205ENST00000476387 MID1O15344 667 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 ENDOD1O94919 500 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 ADH1BP00325 375 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 IGHV4-34P06331 123 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 TPM3P06753 285 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 GPD1P21695 349 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 MZF1P28698 734 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-205ENST00000476387 NUMBP49757 651 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 VASPP50552 380 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-205ENST00000476387 KLHL30Q0D2K2 578 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 ELAVL3Q14576 367 aaKnown RBP16.62■□□□□ 0.25
COL1A1-205ENST00000476387 KIF19Q2TAC6 998 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 CCDC14Q49A88 953 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 C5orf22Q49AR2 442 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 FIGNQ5HY92 759 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 DBX2Q6ZNG2 339 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 FAM172AQ8WUF8 416 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 C1orf74Q96LT6 269 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 MCEEQ96PE7 176 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 FAM129BQ96TA1 746 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 ORAI3Q9BRQ5 295 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 TTYH3Q9C0H2 523 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 TMPRSS4Q9NRS4 437 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 AIPL1Q9NZN9 384 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 SLC25A13Q9UJS0 675 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 VPS28Q9UK41 221 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 ANKRD6Q9Y2G4 727 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 SNX10Q9Y5X0 201 aa16.62■□□□□ 0.25
COL1A1-205ENST00000476387 ASPMQ8IZT6 3477 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 ZZEF1O43149 2961 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 A0A1W2PP55 124 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 LRRC72A6NJI9 287 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 SIGLEC16A6NMB1 481 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 TMCO5BA8MYB1 307 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 C10orf142B7Z368 130 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 FLRT2O43155 660 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 SRGAP2O75044 1071 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 CNTN5O94779 1100 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 RHOCP08134 193 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 FTH1P19P0C7X4 201 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 SLC8A1P32418 973 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 RFC1P35251 1148 aaPredicted RBP16.61■□□□□ 0.25
COL1A1-205ENST00000476387 STK19P49842 368 aaPredicted RBP16.61■□□□□ 0.25
COL1A1-205ENST00000476387 GALCP54803 685 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 SUZ12Q15022 739 aaKnown RBP16.61■□□□□ 0.25
COL1A1-205ENST00000476387 DCUN1D2Q6PH85 259 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 MMAAQ8IVH4 418 aaKnown RBP16.61■□□□□ 0.25
COL1A1-205ENST00000476387 MCOLN2Q8IZK6 566 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 OR2T34Q8NGX1 318 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 ADAMTS14Q8WXS8 1223 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 PTPRN2Q92932 1015 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 IQCDQ96DY2 449 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 RPL10LQ96L21 214 aaKnown RBP16.61■□□□□ 0.25
COL1A1-205ENST00000476387 OMDQ99983 421 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 SYT11Q9BT88 431 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 NEUROG2Q9H2A3 272 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 HAUS4Q9H6D7 363 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 IFNKQ9P0W0 207 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 SERGEFQ9UGK8 458 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 KLK13Q9UKR3 277 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 ZMIZ1Q9ULJ6 1067 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 APOBEC2Q9Y235 224 aaKnown RBP16.61■□□□□ 0.25
COL1A1-205ENST00000476387 TBC1D30Q9Y2I9 924 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 SNX11Q9Y5W9 270 aa16.61■□□□□ 0.25
COL1A1-205ENST00000476387 IGLV3-10A0A075B6K4 115 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 A0A1W2PPC4 97 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 A0A1W2PQJ5 194 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 DFNA5O60443 496 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 RNASEH2AO75792 299 aaKnown RBP16.6■□□□□ 0.25
COL1A1-205ENST00000476387 GOT1P17174 413 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 C5AR1P21730 350 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 PRKCIP41743 596 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms