RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 DDIT4Q9NX09 232 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 VPS28Q9UK41 221 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 VANGL2Q9ULK5 521 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 PCDHB1Q9Y5F3 818 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 FLNBO75369 2602 aaKnown RBP14.39□□□□□ -0.11
CCDC78-209ENST00000474647 TEX51A0A1B0GUA7 166 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 TRIM38O00635 465 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 PMM2O15305 246 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 SLC31A1O15431 190 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 RNGTTO60942 597 aaKnown RBP14.38□□□□□ -0.11
CCDC78-209ENST00000474647 MT-CO3P00414 261 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 GNA15P30679 374 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 CCR1P32246 355 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 IRAK1P51617 712 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 OXCT1P55809 520 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 TAF5Q15542 800 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 DLG2Q15700 870 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 TBC1D25Q3MII6 688 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 BEND5Q7L4P6 421 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 ERICH1Q86X53 443 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 SPACA3Q8IXA5 215 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 DCBLD1Q8N8Z6 715 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 EHBP1Q8NDI1 1231 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 RFFLQ8WZ73 363 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 FAM131CQ96AQ9 280 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 MED15Q96RN5 788 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 SLC4A5Q9BY07 1137 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 GTPBP4Q9BZE4 634 aaKnown RBP14.38□□□□□ -0.11
CCDC78-209ENST00000474647 INTS2Q9H0H0 1204 aaKnown RBP14.38□□□□□ -0.11
CCDC78-209ENST00000474647 MUC3BQ9H195 1237 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 THAP9Q9H5L6 903 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 ACP6Q9NPH0 428 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 UCKL1Q9NWZ5 548 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 CTNND2Q9UQB3 1225 aa14.38□□□□□ -0.11
CCDC78-209ENST00000474647 ANKRD36A6QL64 1941 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF462Q96JM2 2506 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-209ENST00000474647 KPNA3O00505 521 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-209ENST00000474647 MCF2LO15068 1137 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 ALOX15BO15296 676 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 P4HA2O15460 535 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 ATP9BO43861 1147 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 GRAP2O75791 330 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 SLC2A3P11169 496 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
CCDC78-209ENST00000474647 PLK1P53350 603 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 CDK17Q00537 523 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 E2F1Q01094 437 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 TLE3Q04726 772 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 NME3Q13232 169 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF177Q13360 481 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-209ENST00000474647 PDCLQ13371 301 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF211Q13398 564 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-209ENST00000474647 FBXL22Q6P050 247 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF605Q86T29 641 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 DEFB106AQ8N104 65 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 SLC25A45Q8N413 288 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 SH2D3CQ8N5H7 860 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 OR52K2Q8NGK3 314 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 STK32AQ8WU08 396 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF606Q8WXB4 792 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 DHTKD1Q96HY7 919 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-209ENST00000474647 PPP1R9BQ96SB3 815 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 FEM1AQ9BSK4 669 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 PREBQ9HCU5 417 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 UBE2TQ9NPD8 197 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-209ENST00000474647 HOOK1Q9UJC3 728 aaKnown RBP14.37□□□□□ -0.11
CCDC78-209ENST00000474647 PPM1HQ9ULR3 514 aa14.37□□□□□ -0.11
CCDC78-209ENST00000474647 COL6A6A6NMZ7 2263 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 A0A1W2PQU0 124 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 AFPP02771 609 aaKnown RBP14.36□□□□□ -0.11
CCDC78-209ENST00000474647 MPOP05164 745 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 PLA2G2AP14555 144 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 DGKAP23743 735 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 USP8P40818 1118 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 PCBP4P57723 403 aaKnown RBP14.36□□□□□ -0.11
CCDC78-209ENST00000474647 TAS2R38P59533 333 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 KCNMA1Q12791 1236 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 KCNH2Q12809 1159 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 AUHQ13825 339 aaKnown RBP14.36□□□□□ -0.11
CCDC78-209ENST00000474647 PIP5KL1Q5T9C9 394 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 TMEM110Q86TL2 294 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 PASD1Q8IV76 773 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF843Q8N446 348 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 OR4C6Q8NH72 309 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 SPATA20Q8TB22 786 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 NELFBQ8WX92 580 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 ALG14Q96F25 216 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 CCDC114Q96M63 670 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 CAAP1Q9H8G2 361 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 DYRK4Q9NR20 520 aa14.36□□□□□ -0.11
CCDC78-209ENST00000474647 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
CCDC78-209ENST00000474647 LRP4O75096 1905 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 PCDH8O95206 1070 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 CTSLP07711 333 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 ALPPL2P10696 532 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 SRCP12931 536 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 MYF5P13349 255 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 HNRNPA2B1P22626 353 aaKnown RBP14.35□□□□□ -0.11
CCDC78-209ENST00000474647 AKT2P31751 481 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms