RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 USP26Q9BXU7 913 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 WNT8AQ9H1J5 351 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 MRPL44Q9H9J2 332 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SIRT3Q9NTG7 399 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 C14orf119Q9NWQ9 140 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 FOXD3Q9UJU5 478 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 RNF112Q9ULX5 631 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SOX13Q9UN79 622 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 AKT3Q9Y243 479 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 USP15Q9Y4E8 981 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ADGRF5Q8IZF2 1346 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ADGRA2Q96PE1 1338 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM47DPA6NHR8 397 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 H3BML4 177 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 OGTO15294 1046 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 CLDN3O15551 220 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 NUDT21O43809 227 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 GPRIN2O60269 458 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 F13A1P00488 732 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 IFNA14P01570 189 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 IL1AP01583 271 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 TPOP07202 933 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ATF6P18850 670 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 HSPA7P48741 367 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 OCRLQ01968 901 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ENPEPQ07075 957 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 GOLGA8FQ08AF8 430 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 GOLGA8DPQ0D2H9 430 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 DUSP4Q13115 394 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 USP10Q14694 798 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 PDK1Q15118 436 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 RPS6KA2Q15349 733 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 CCDC142Q17RM4 750 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ADCK5Q3MIX3 580 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SLC9B1Q4ZJI4 515 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 GLRA4Q5JXX5 417 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 C9orf50Q5SZB4 431 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ATXN7L2Q5T6C5 722 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 CACHD1Q5VU97 1274 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ANKRD40Q6AI12 368 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ATG14Q6ZNE5 492 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 BTLAQ7Z6A9 289 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 FGD2Q7Z6J4 655 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 TMCO2Q7Z6W1 182 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 PLEKHH3Q7Z736 793 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 GPR149Q86SP6 731 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 MAPKAPK5Q8IW41 473 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SCUBE1Q8IWY4 988 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF680Q8NEM1 530 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 DNAJB8Q8NHS0 232 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 CFAP61Q8NHU2 1237 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 KLHDC4Q8TBB5 520 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SLC7A14Q8TBB6 771 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 LRTOMTQ8WZ04 291 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 TNFRSF25Q93038 417 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM162AQ96A26 154 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SIPA1Q96FS4 1042 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 HMCESQ96FZ2 354 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 KCNJ15Q99712 375 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 HIPK3Q9H422 1215 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 OPA3Q9H6K4 179 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ATP13A3Q9H7F0 1226 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF395Q9H8N7 513 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 FBRSL1Q9HCM7 1045 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 C12orf4Q9NQ89 552 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ARHGEF4Q9NR80 690 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 ASNSD1Q9NWL6 643 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 TMEM160Q9NX00 188 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 SOHLH2Q9NX45 425 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 MRPL39Q9NYK5 338 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 WHRNQ9P202 907 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 AGAP1Q9UPQ3 857 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM169AQ9Y6X4 670 aa6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 TEP1Q99973 2627 aaKnown RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 IBTKQ9P2D0 1353 aaPredicted RBP6.23□□□□□ -1.41
SMARCE1-208ENST00000474246 CD163L1Q9NR16 1453 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 HTTP42858 3142 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 DENND3A2RUS2 1198 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 BTBD19C9JJ37 291 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 FOXP2O15409 715 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SUSD5O60279 629 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 LILRB5O75023 590 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CDC123O75794 336 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 FKBP9O95302 570 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 IL2RAP01589 272 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 HMGCRP04035 888 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 FYNP06241 537 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 NFICP08651 508 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CLTAP09496 248 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 MYBL1P10243 752 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 NPR1P16066 1061 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 GPTP24298 496 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CTSSP25774 331 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PSMA2P25787 234 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PCSK1P29120 753 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 RRM2P31350 389 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 IGFALSP35858 605 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PRR20EP86478 221 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PRR20CP86479 221 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms