RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 LRRC32Q14392 662 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 GEN1Q17RS7 908 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 GAB4Q2WGN9 574 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 ARTNQ5T4W7 220 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 TMCO4Q5TGY1 634 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 AFMIDQ63HM1 303 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 SDE2Q6IQ49 451 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 DARS2Q6PI48 645 aaKnown RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 NPNTQ6UXI9 565 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 KIAA0907Q7Z7F0 614 aaPredicted RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 ZC3H18Q86VM9 953 aaKnown RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 CDKL3Q8IVW4 592 aaPredicted RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 APCDD1Q8J025 514 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 SIX5Q8N196 739 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 ACTL9Q8TC94 416 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 NECAB3Q96P71 396 aaPredicted RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 ACE2Q9BYF1 805 aaPredicted RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 MFSD1Q9H3U5 465 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 ELOVL2Q9NXB9 296 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 MFHAS1Q9Y4C4 1052 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 A0A0A0MRY4 1105 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 CXorf51AA0A1B0GTR3 108 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 SRPRAP08240 638 aaKnown RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 RENBPP51606 427 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 ZXDAP98168 799 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 LMNB2Q03252 620 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 ADCY2Q08462 1091 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 KLF1Q13351 362 aaPredicted RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 NOMO1Q15155 1222 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 FUT11Q495W5 492 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 HEATR6Q6AI08 1181 aaKnown RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 TRMT11Q7Z4G4 463 aaKnown RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 ARHGAP12Q8IWW6 846 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 CCDC13Q8IYE1 715 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 KCNV2Q8TDN2 545 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 CASKIN2Q8WXE0 1202 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 TTC17Q96AE7 1141 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 HDAC11Q96DB2 347 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 P2RY11Q96G91 374 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 ZNF599Q96NL3 588 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 KLC2Q9H0B6 622 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 NOL6Q9H6R4 1146 aaKnown RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 SAE1Q9UBE0 346 aaPredicted RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 UBA2Q9UBT2 640 aaPredicted RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 FEZ2Q9UHY8 353 aaPredicted RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
CCM2-205ENST00000472223 NDRG2Q9UN36 371 aaKnown RBP17.22■□□□□ 0.35
CCM2-205ENST00000472223 KIAA1549LQ6ZVL6 1849 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 TRIM24O15164 1050 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 DCXO43602 365 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 MAP3K6O95382 1288 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 DLDP09622 509 aaKnown RBP17.21■□□□□ 0.35
CCM2-205ENST00000472223 RBP3P10745 1247 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 PECAM1P16284 738 aaPredicted RBP17.21■□□□□ 0.35
CCM2-205ENST00000472223 SLC10A2Q12908 348 aaPredicted RBP17.21■□□□□ 0.35
CCM2-205ENST00000472223 BYSLQ13895 437 aaKnown RBP17.21■□□□□ 0.35
CCM2-205ENST00000472223 RFTN1Q14699 578 aaPredicted RBP17.21■□□□□ 0.35
CCM2-205ENST00000472223 UBXN2BQ14CS0 331 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 CCNG2Q16589 344 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 WHAMMP3Q1A5X7 153 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 ACCSLQ4AC99 568 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 TMEM196Q5HYL7 178 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 DGKKQ5KSL6 1271 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 ADIPOR2Q86V24 386 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 ATP11CQ8NB49 1132 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 OR52K2Q8NGK3 314 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 ALG14Q96F25 216 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 LMLNQ96KR4 655 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 TSGA13Q96PP4 275 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 VPS51Q9UID3 782 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 ZNF148Q9UQR1 794 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 OR51B4Q9Y5P0 310 aa17.21■□□□□ 0.35
CCM2-205ENST00000472223 TCRBV7S2A1N4TA0A589 114 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 KANSL1LA0AUZ9 987 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 CFAP69A5D8W1 941 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 MATN3O15232 486 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 PRAMEF11O60813 436 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 ACTN2P35609 894 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 NUMBP49757 651 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 CLCN6P51797 869 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 STARD6P59095 220 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 PPIDQ08752 370 aaKnown RBP17.2■□□□□ 0.34
CCM2-205ENST00000472223 SIGLEC14Q08ET2 396 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 FNDC3BQ53EP0 1204 aaKnown RBP17.2■□□□□ 0.34
CCM2-205ENST00000472223 INO80DQ53TQ3 878 aaPredicted RBP17.2■□□□□ 0.34
CCM2-205ENST00000472223 SLC45A4Q5BKX6 768 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 MARC1Q5VT66 337 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 TXNDC11Q6PKC3 985 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 GSTA5Q7RTV2 222 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 CREG2Q8IUH2 290 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 PHTF2Q8N3S3 785 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 CCDC33Q8N5R6 958 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 NETO2Q8NC67 525 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 C1orf54Q8WWF1 131 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 EDAQ92838 391 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 MAGOHBQ96A72 148 aaKnown RBP17.2■□□□□ 0.34
CCM2-205ENST00000472223 RUNDC3BQ96NL0 473 aa17.2■□□□□ 0.34
CCM2-205ENST00000472223 AP1M1Q9BXS5 423 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms