RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 CLCN6P51797 869 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 IFI35P80217 286 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-207ENST00000471342 GAD2Q05329 585 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 NIPAL4Q0D2K0 466 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 SLC10A7Q0GE19 358 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 TFDP2Q14188 446 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 NAA30Q147X3 362 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-207ENST00000471342 ITPRIPL2Q3MIP1 535 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 PARP15Q460N3 678 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 SLC45A4Q5BKX6 768 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 TMEM196Q5HYL7 178 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 PITRM1Q5JRX3 1037 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 RABGAP1LQ5R372 815 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 SEL1L2Q5TEA6 688 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 EMC10Q5UCC4 262 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 ALG1LQ6GMV1 187 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 LRRC31Q6UY01 552 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 ZNF783Q6ZMS7 281 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 LEKR1Q6ZMV7 388 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 LZTR1Q8N653 840 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 DCAF4L2Q8NA75 395 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 ARRDC2Q8TBH0 407 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 DDI1Q8WTU0 396 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 ATP2A3Q93084 1043 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 DDX50Q9BQ39 737 aaKnown RBP10.11□□□□□ -0.79
SF3A1-207ENST00000471342 TMEM121Q9BTD3 319 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 EPC1Q9H2F5 836 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 CATSPERBQ9H7T0 1116 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 LHX3Q9UBR4 397 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 DMGDHQ9UI17 866 aaKnown RBP10.11□□□□□ -0.79
SF3A1-207ENST00000471342 IPO11Q9UI26 975 aaKnown RBP10.11□□□□□ -0.79
SF3A1-207ENST00000471342 SLCO3A1Q9UIG8 710 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 DUSP12Q9UNI6 340 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 ATP8A1Q9Y2Q0 1164 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 STARD13Q9Y3M8 1113 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 MTF2Q9Y483 593 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-207ENST00000471342 HEY1Q9Y5J3 304 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 RAD54BQ9Y620 910 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 F5P12259 2224 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 CXorf51AA0A1B0GTR3 108 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 TTC24A2A3L6 582 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 C5orf60A6NFR6 353 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 C10orf142B7Z368 130 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 KCNK1O00180 336 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 KRIT1O00522 736 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 MATN3O15232 486 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 RAD51CO43502 376 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 RAMP2O60895 175 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 ITGAVP06756 1048 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 SRFP11831 508 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 PABPC1P11940 636 aaKnown RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 HNRNPLP14866 589 aaKnown RBP eCLIP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 ZFXP17010 805 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 RPL22P35268 128 aaKnown RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 IFNAR2P48551 515 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 FNTAP49354 379 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 EIF3EP60228 445 aaKnown RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 ZNF33AQ06730 810 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 IL10RBQ08334 325 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 ZNF177Q13360 481 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 TDGQ13569 410 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 SNX1Q13596 522 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 TUBB2AQ13885 445 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 GAS6Q14393 721 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 KCTD11Q693B1 232 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 PRPF39Q86UA1 669 aaKnown RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 ZC3H18Q86VM9 953 aaKnown RBP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 RNF135Q8IUD6 432 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 CCDC50Q8IVM0 306 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 MFN1Q8IWA4 741 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 ZNF567Q8N184 647 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 AGGF1Q8N302 714 aaeCLIP10.1□□□□□ -0.79
SF3A1-207ENST00000471342 CARNMT1Q8N4J0 409 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 TTC16Q8NEE8 873 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 P3H4Q92791 437 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 DNASE1L2Q92874 299 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 ACOX2Q99424 681 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 TUBB2BQ9BVA1 445 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 TMEM245Q9H330 911 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 MTG2Q9H4K7 406 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 HEBP1Q9NRV9 189 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 AMACRQ9UHK6 382 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 GGA2Q9UJY4 613 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 HS3ST2Q9Y278 367 aa10.1□□□□□ -0.79
SF3A1-207ENST00000471342 NUP205Q92621 2012 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 TCRBV7S3A2A0A539 114 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 HACD1B0YJ81 288 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 SPECC1L-ADORA2AF8WAN1 911 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 ZBTB24O43167 697 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 GCATO75600 419 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 NFATC1O95644 943 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 RHOCP08134 193 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 SRCP12931 536 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 MAGEA6P43360 314 aa10.09□□□□□ -0.79
SF3A1-207ENST00000471342 STK19P49842 368 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-207ENST00000471342 CBLBQ13191 982 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms