RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ERGIC2Q96RQ1 377 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 C2orf49Q9BVC5 232 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 ADAM33Q9BZ11 813 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 NOCTQ9UK39 431 aaKnown RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 VPS28Q9UK41 221 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 HS3ST2Q9Y278 367 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 PCDHB9Q9Y5E1 797 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 A0A1W2PPC4 97 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 LGALS16A8MUM7 142 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 MCF2LO15068 1137 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 SH3BP5O60239 455 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 RNASEH2AO75792 299 aaKnown RBP13.85□□□□□ -0.19
HMGN1-211ENST00000471260 IL1BP01584 269 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 IGHV4-34P06331 123 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 ZNF18P17022 549 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 CDK11BP21127 795 aaKnown RBP13.85□□□□□ -0.19
HMGN1-211ENST00000471260 CSNK1EP49674 416 aaKnown RBP13.85□□□□□ -0.19
HMGN1-211ENST00000471260 CCR5P51681 352 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 GSCP56915 257 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-211ENST00000471260 FMO1Q01740 532 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 BNC1Q01954 994 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 FOXC1Q12948 553 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 ZNF423Q2M1K9 1284 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 HLA-BQ31612 363 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 ARL13BQ3SXY8 428 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 ACCSLQ4AC99 568 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 C6orf118Q5T5N4 469 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 NCEH1Q6PIU2 408 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 ZNF783Q6ZMS7 281 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 NYAP1Q6ZVC0 841 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 NAXDQ8IW45 347 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 C17orf53Q8N3J3 647 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-211ENST00000471260 SH2D3CQ8N5H7 860 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 OR52K2Q8NGK3 314 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 OR8D1Q8WZ84 308 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 ANKRD7Q92527 254 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 ORAI3Q9BRQ5 295 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 MUC3BQ9H195 1237 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 NLRC4Q9NPP4 1024 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 ANLNQ9NQW6 1124 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 TM7SF3Q9NS93 570 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 PPARGC1AQ9UBK2 798 aaKnown RBP13.85□□□□□ -0.19
HMGN1-211ENST00000471260 SERGEFQ9UGK8 458 aa13.85□□□□□ -0.19
HMGN1-211ENST00000471260 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-211ENST00000471260 CXorf51AA0A1B0GTR3 108 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 A0A1B0GVT2 93 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 E9PAM4 449 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 C1QTNF3-AMACRE9PGA6 284 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 GOLGA8SH3BPF8 625 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 I6L893 689 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-211ENST00000471260 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
HMGN1-211ENST00000471260 VILLO15195 856 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 FLRT2O43155 660 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 CNTN5O94779 1100 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 RHOCP08134 193 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 CCDC172P0C7W6 258 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 UNGP13051 313 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-211ENST00000471260 TNNT1P13805 278 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 OR1E1P30953 314 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 NUDT1P36639 197 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 PSMD8P48556 350 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 KLK7P49862 253 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 IRAK1P51617 712 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 CLCN6P51797 869 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 ADPRHP54922 357 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 CCDC15Q0P6D6 951 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 TRIP6Q15654 476 aaKnown RBP13.84□□□□□ -0.19
HMGN1-211ENST00000471260 DLG2Q15700 870 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 ST3GAL2Q16842 350 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 ALFQ53S48 1182 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 ADAT2Q7Z6V5 191 aaKnown RBP13.84□□□□□ -0.19
HMGN1-211ENST00000471260 GLRX5Q86SX6 157 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 AADATQ8N5Z0 425 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 DCAF4L2Q8NA75 395 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 CCDC114Q96M63 670 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 PCMTD1Q96MG8 357 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-211ENST00000471260 CFAP57Q96MR6 1250 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 PPM1HQ9ULR3 514 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 ANKRD6Q9Y2G4 727 aa13.84□□□□□ -0.19
HMGN1-211ENST00000471260 KNL1Q8NG31 2342 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 SPAARA0A1B0GVQ0 90 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 ILVBLA1L0T0 632 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 FAM221BA6H8Z2 402 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 FAM47DPA6NHR8 397 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 EPHB6O15197 1021 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 SKILP12757 684 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 CHRNB2P17787 502 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 SDC4P31431 198 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 DRD3P35462 400 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 GGCXP38435 758 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 PTPN9P43378 593 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 NSFP46459 744 aaKnown RBP13.83□□□□□ -0.2
HMGN1-211ENST00000471260 NRG1Q02297 640 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-211ENST00000471260 UBXN1Q04323 297 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 SLC20A2Q08357 652 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 NCAPHQ15003 741 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 C2CD6Q53TS8 623 aa13.83□□□□□ -0.2
HMGN1-211ENST00000471260 TRNP1Q6NT89 227 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms