RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 MSTO1Q9BUK6 570 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 ADI1Q9BV57 179 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 GATA5Q9BWX5 397 aaPredicted RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 NGRNQ9NPE2 291 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 SNX15Q9NRS6 342 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 FBXO28Q9NVF7 368 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 DUS2Q9NX74 493 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 UTP6Q9NYH9 597 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 GMPR2Q9P2T1 348 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CNOT11Q9UKZ1 510 aaKnown RBP9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 CDH7Q9ULB5 785 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 ATP11BQ9Y2G3 1177 aa9.71□□□□□ -0.86
NHLRC3-203ENST00000470258 TOR1BO14657 336 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 PFDN6O15212 129 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 HDAC3O15379 428 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 PRPSAP2O60256 369 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 TRUB2O95900 331 aaKnown RBP9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 PRKCGP05129 697 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 MGAT1P26572 445 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 MYL6P60660 151 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 JAG1P78504 1218 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 PRKCQQ04759 706 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 STILQ15468 1287 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 DGKDQ16760 1214 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 FAM47CQ5HY64 1035 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 SLC27A3Q5K4L6 730 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 B3GNT9Q6UX72 402 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 CPXCR1Q8N123 301 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 CADM3Q8N126 398 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 PBXIP1Q96AQ6 731 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 GMCL1Q96IK5 515 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 ANKRD36BP1Q96IX9 119 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 SLC39A3Q9BRY0 314 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 IL1RL2Q9HB29 575 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 NARFQ9UHQ1 456 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 SLC27A5Q9Y2P5 690 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 MRPL11Q9Y3B7 192 aaKnown RBP9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 SPDYE2BA6NHP3 402 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 LRRIQ4A6NIV6 560 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 KPNA7A9QM74 516 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 TMEM233B4DJY2 109 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 C9IYK1 514 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 PSMD11O00231 422 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 TRIM13O60858 407 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 LSM8O95777 96 aaKnown RBP9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 SPDYE6P0CI01 402 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 ARSAP15289 507 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 CNTFP26441 200 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 RAP1GAPP47736 663 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 RAD23AP54725 363 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 NAGLUP54802 743 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 RHDQ02161 417 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 SPDYE2Q495Y8 402 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 NHSL2Q5HYW2 709 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 HMBOX1Q6NT76 420 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 RNF19BQ6ZMZ0 732 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 PQLC3Q8N755 202 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 PLD5Q8N7P1 536 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 ACMSDQ8TDX5 336 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 CANT1Q8WVQ1 401 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 TFAP2CQ92754 450 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 ASB9Q96DX5 294 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 CPXM1Q96SM3 734 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 ADPGKQ9BRR6 497 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 CCDC167Q9P0B6 97 aa9.7□□□□□ -0.86
NHLRC3-203ENST00000470258 HEATR9A2RTY3 570 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 APOL1O14791 398 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 MYO1DO94832 1006 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 INHBBP09529 407 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 GARTP22102 1010 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 PHKG1Q16816 387 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ANO4Q32M45 955 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TIFABQ6ZNK6 161 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 DCLK2Q8N568 766 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 PCYOX1LQ8NBM8 494 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 CMASQ8NFW8 434 aaPredicted RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ACER1Q8TDN7 264 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TMEM174Q8WUU8 243 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TRUB1Q8WWH5 349 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 LRRC39Q96DD0 335 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 SGF29Q96ES7 293 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 C1orf50Q9BV19 199 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 TARS2Q9BW92 718 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 MTMR12Q9C0I1 747 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 UPF3AQ9H1J1 476 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 SEPT9Q9UHD8 586 aaPredicted RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 CYTH4Q9UIA0 394 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 PCDHGC3Q9UN70 934 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 COPG1Q9Y678 874 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 A0A096LPK6 155 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 DHX15O43143 795 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 B4GAT1O43505 415 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 RAD17O75943 681 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 MT-CO1P00395 513 aa9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 GARSP41250 739 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-203ENST00000470258 RPL14P50914 215 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms