RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 PSMD5Q16401 504 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 UGCGQ16739 394 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 SLC5A9Q2M3M2 681 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 COL28A1Q2UY09 1125 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 C19orf48Q6RUI8 117 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 PRSS55Q6UWB4 352 aaPredicted RBP4.55□□□□□ -1.68
SSR3-204ENST00000467733 Q6ZS52 159 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 RTL10Q7L3V2 364 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 RD3Q7Z3Z2 195 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 HEATR3Q7Z4Q2 680 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 STRA8Q7Z7C7 330 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 PLA2G4DQ86XP0 818 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 DEPDC1BQ8WUY9 529 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 MYEOVQ96EZ4 313 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 PGBD1Q96JS3 809 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 ZC3H10Q96K80 434 aaKnown RBP4.55□□□□□ -1.68
SSR3-204ENST00000467733 ACAP3Q96P50 834 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 FDXACB1Q9BRP7 624 aaPredicted RBP4.55□□□□□ -1.68
SSR3-204ENST00000467733 ZNF577Q9BSK1 485 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 TRMT61BQ9BVS5 477 aaKnown RBP4.55□□□□□ -1.68
SSR3-204ENST00000467733 COLEC11Q9BWP8 271 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 SYNPO2LQ9H987 977 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 ZFP14Q9HCL3 533 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 ZNF334Q9HCZ1 680 aaPredicted RBP4.55□□□□□ -1.68
SSR3-204ENST00000467733 UBN1Q9NPG3 1134 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 RIC8AQ9NPQ8 531 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 TMEM9BQ9NQ34 198 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 DIAPH3Q9NSV4 1193 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 RBM12Q9NTZ6 932 aaKnown RBP4.55□□□□□ -1.68
SSR3-204ENST00000467733 TBC1D22BQ9NU19 505 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 C2orf42Q9NWW7 574 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 ADAM28Q9UKQ2 775 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 KLK13Q9UKR3 277 aa4.55□□□□□ -1.68
SSR3-204ENST00000467733 MYO9AB2RTY4 2548 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 TSC2P49815 1807 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 IGKV6-21A0A0C4DH24 114 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 PRSS38A1L453 326 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 BCLAF3A2AJT9 711 aaKnown RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 WDR27A2RRH5 827 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 CYSRT1A8MQ03 144 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 FAM86B1E9PN63 330 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 ADAM12O43184 909 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 SCAF4O95104 1147 aaKnown RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 CAVIN2O95810 425 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 FAM86B2P0C5J1 330 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 CCDC192P0DO97 292 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 PSMC3P17980 439 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 CCNE1P24864 410 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 GDI1P31150 447 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 HOXA11P31270 313 aaPredicted RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 NAPAP54920 295 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 MANFP55145 182 aaKnown RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 TMPRSS15P98073 1019 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 GRIK3Q13003 919 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 ELF2Q15723 593 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 PLK5Q496M5 336 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 FAM78AQ5JUQ0 283 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 DGKKQ5KSL6 1271 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 C20orf194Q5TEA3 1177 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 PDXDC1Q6P996 788 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 CWC27Q6UX04 472 aaKnown RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 VITQ6UXI7 678 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 Q6YL49 198 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 SPATS2Q86XZ4 545 aaKnown RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 RHPN2Q8IUC4 686 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 GLB1L2Q8IW92 636 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 SRBD1Q8N5C6 995 aaKnown RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 CNNM3Q8NE01 707 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 DEFB124Q8NES8 71 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 CRYGNQ8WXF5 182 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 RILPL2Q969X0 211 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 CCDC51Q96ER9 411 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 MCRS1Q96EZ8 462 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 NLRP4Q96MN2 994 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 GAD1Q99259 594 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 CLSTN3Q9BQT9 956 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 APOL6Q9BWW8 343 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 SLC46A2Q9BY10 475 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 C8orf33Q9H7E9 229 aaPredicted RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 IFT122Q9HBG6 1241 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 NRBP2Q9NSY0 501 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 SUCLA2Q9P2R7 463 aaPredicted RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.54□□□□□ -1.68
SSR3-204ENST00000467733 IPPQ9Y573 584 aa4.54□□□□□ -1.68
SSR3-204ENST00000467733 TEP1Q99973 2627 aaKnown RBP4.54□□□□□ -1.68
SSR3-204ENST00000467733 CITO14578 2027 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 KNTC1P50748 2209 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 PCDH15Q96QU1 1955 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 hCG_1642624A0A1W2PR95 340 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 ARHGEF37A1IGU5 675 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 MYBPHLA2RUH7 354 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 KRTAP29-1A8MX34 341 aaPredicted RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 H0Y626 953 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 HIP1O00291 1037 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 ZNF263O14978 683 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 EXTL3O43909 919 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 TRIM16O95361 564 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 ERBB2P04626 1255 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 CYP3A4P08684 503 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 HNRNPLP14866 589 aaKnown RBP eCLIP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms