RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 ARHGAP25P42331 645 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 HADHBP55084 474 aaKnown RBP9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 YBEYP58557 167 aaPredicted RBP9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 RPS14P62263 151 aaKnown RBP9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 ARF5P84085 180 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SLC20A2Q08357 652 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 DPYSQ14117 519 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 DAB2IPQ5VWQ8 1189 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 AFMIDQ63HM1 303 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 PMS2CLQ68D20 193 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 RWDD4Q6NW29 188 aaKnown RBP9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 CEP68Q76N32 757 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 TMTC1Q8IUR5 882 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 TMEM139Q8IV31 216 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 RHOT2Q8IXI1 618 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZNF366Q8N895 744 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 OR7D4Q8NG98 312 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SLC35G2Q8TBE7 412 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 TSC1Q92574 1164 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 RUBCNQ92622 972 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 FAM131CQ96AQ9 280 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SIPA1Q96FS4 1042 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SPACA7Q96KW9 195 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 RPL10LQ96L21 214 aaKnown RBP9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 FAM129BQ96TA1 746 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 KLC2Q9H0B6 622 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 MUC3BQ9H195 1237 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SLC6A17Q9H1V8 727 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 LRRC19Q9H756 370 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 CATSPERBQ9H7T0 1116 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 GPATCH2LQ9NWQ4 482 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 DONSONQ9NYP3 566 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 BCCIPQ9P287 314 aaKnown RBP eCLIP9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 CTTNBP2NLQ9P2B4 639 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 PCSK1NQ9UHG2 260 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SLC25A13Q9UJS0 675 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 RAB23Q9ULC3 237 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 SCML1Q9UN30 329 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 PCDHGA5Q9Y5G8 931 aa9.7□□□□□ -0.86
SDCCAG3-208ENST00000466579 DCLK1O15075 740 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ALOX15BO15296 676 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 KDELR3O43731 214 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 CREB3O43889 395 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 RAMP2O60895 175 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZNF821O75541 412 aaPredicted RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 RHOBTB1O94844 696 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 MT-CO1P00395 513 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 RARAP10276 462 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 GLDCP23378 1020 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 OXTRP30559 389 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ACVRL1P37023 503 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 NNMTP40261 264 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 TPMTP51580 245 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ARSEP51690 589 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 NDST2P52849 883 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 TPI1P60174 286 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 EP300Q09472 2414 aaPredicted RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ELAVL3Q14576 367 aaKnown RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 DLG2Q15700 870 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 PARP15Q460N3 678 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZNF776Q68DI1 518 aaPredicted RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 TXNRD3NBQ6F5E7 133 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 RETSATQ6NUM9 610 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 SLC36A4Q6YBV0 504 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 PRR23BQ6ZRT6 265 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 RFX8Q6ZV50 586 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 USP30Q70CQ3 517 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 GVINP1Q7Z2Y8 2422 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 POLNQ7Z5Q5 900 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ALYREFQ86V81 257 aaKnown RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 PLPP6Q8IY26 295 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 PGBD3Q8N328 593 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 FRMD1Q8N878 549 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 RLN3Q8WXF3 142 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 RFFLQ8WZ73 363 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 PRCCQ92733 491 aaPredicted RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ISG20Q96AZ6 181 aaKnown RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 CEP44Q9C0F1 390 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 MTG2Q9H4K7 406 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 DHX35Q9H5Z1 703 aaKnown RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 ATP13A1Q9HD20 1204 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 OSGEPQ9NPF4 335 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 PLSCR2Q9NRY7 297 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 WSB2Q9NYS7 404 aaPredicted RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 CWC15Q9P013 229 aaKnown RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 RCOR3Q9P2K3 495 aaPredicted RBP9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 DNAI1Q9UI46 699 aa9.69□□□□□ -0.86
SDCCAG3-208ENST00000466579 A0A0A6YYK5 440 aaPredicted RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZSCAN5CA6NGD5 496 aaPredicted RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 EEF2KO00418 725 aaKnown RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 MCF2LO15068 1137 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 SMAD6O43541 496 aaKnown RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 NDUFA10O95299 355 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 VAV1P15498 845 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 GOT1P17174 413 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 ERCC2P18074 760 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 IL4RP24394 825 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 CYLC1P35663 651 aaPredicted RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 MAGEA1P43355 309 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 SERPINH1P50454 418 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms