RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.39□□□□□ -0.59
VCP-204ENST00000466100 PRRT4C9JH25 899 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 J3KR12 359 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 DFFAO00273 331 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 NCAM2O15394 837 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 KDELR3O43731 214 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 SNAP91O60641 907 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 PRAMEF11O60813 436 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 CD160O95971 181 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 VAV1P15498 845 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 NUMBP49757 651 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 EIF3EP60228 445 aaKnown RBP11.39□□□□□ -0.59
VCP-204ENST00000466100 ARF5P84085 180 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 TUBB2AQ13885 445 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 DMC1Q14565 340 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 CCNG2Q16589 344 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 SLC45A4Q5BKX6 768 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 CCDC181Q5TID7 509 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 BZW1Q7L1Q6 419 aaKnown RBP11.39□□□□□ -0.59
VCP-204ENST00000466100 CCDC117Q8IWD4 279 aaPredicted RBP11.39□□□□□ -0.59
VCP-204ENST00000466100 SUGP1Q8IWZ8 645 aaKnown RBP11.39□□□□□ -0.59
VCP-204ENST00000466100 GJD3Q8N144 294 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 AHI1Q8N157 1196 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 ZNF687Q8N1G0 1237 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 ATPAF2Q8N5M1 289 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 C1orf54Q8WWF1 131 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 MAML1Q92585 1016 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 PNKPQ96T60 521 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 LGMNQ99538 433 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 TUBB2BQ9BVA1 445 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 AP1M1Q9BXS5 423 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 L2HGDHQ9H9P8 463 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 ATP13A1Q9HD20 1204 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 IPO11Q9UI26 975 aaKnown RBP11.39□□□□□ -0.59
VCP-204ENST00000466100 VPS28Q9UK41 221 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 HCN2Q9UL51 889 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 DNPEPQ9ULA0 475 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 BCLAF3A2AJT9 711 aaKnown RBP11.38□□□□□ -0.59
VCP-204ENST00000466100 KRIT1O00522 736 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
VCP-204ENST00000466100 MCF2LO15068 1137 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 PHF2O75151 1096 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 KAT7O95251 611 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 RBP3P10745 1247 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 CCNCP24863 283 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 GRIA2P42262 883 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 PAFAH1B1P43034 410 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 CTSOP43234 321 aaPredicted RBP11.38□□□□□ -0.59
VCP-204ENST00000466100 GALK1P51570 392 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 IL10RBQ08334 325 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 EIF4HQ15056 248 aaKnown RBP11.38□□□□□ -0.59
VCP-204ENST00000466100 MLF2Q15773 248 aaPredicted RBP11.38□□□□□ -0.59
VCP-204ENST00000466100 SLC44A4Q53GD3 710 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 TMEM196Q5HYL7 178 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 MBLAC2Q68D91 279 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 FSTL4Q6MZW2 842 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 B4GALNT4Q76KP1 1039 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 ZC3H18Q86VM9 953 aaKnown RBP11.38□□□□□ -0.59
VCP-204ENST00000466100 UBALD2Q8IYN6 164 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 ACDQ96AP0 544 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 MYO19Q96H55 970 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 MRGPRX3Q96LB0 322 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 P2RY13Q9BPV8 354 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 C2orf49Q9BVC5 232 aaPredicted RBP11.38□□□□□ -0.59
VCP-204ENST00000466100 BRD8Q9H0E9 1235 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 C10orf88Q9H8K7 445 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 USP29Q9HBJ7 922 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 RBM12Q9NTZ6 932 aaKnown RBP11.38□□□□□ -0.59
VCP-204ENST00000466100 MUTYHQ9UIF7 546 aa11.38□□□□□ -0.59
VCP-204ENST00000466100 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 KRBA1A5PL33 1030 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 K7EQS6 105 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 CBX4O00257 560 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 MATN3O15232 486 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 APODP05090 189 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 ITGAVP06756 1048 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 RBL1P28749 1068 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 FNTAP49354 379 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 VASPP50552 380 aaPredicted RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 CLCN6P51797 869 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 IFI35P80217 286 aaPredicted RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 PRKCQQ04759 706 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 CKAP4Q07065 602 aaKnown RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 WASHC5Q12768 1159 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 BYSLQ13895 437 aaKnown RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 PON2Q15165 354 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 PTPRNQ16849 979 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 PREPLQ4J6C6 727 aaPredicted RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 IL31Q6EBC2 164 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 TPRG1Q6ZUI0 275 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 CDKL3Q8IVW4 592 aaPredicted RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 CCDC13Q8IYE1 715 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 TEX26Q8N6G2 289 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 SPATA4Q8NEY3 305 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 TFB1MQ8WVM0 346 aaKnown RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 SORCS1Q8WY21 1168 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 RTP4Q96DX8 246 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms