RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 NAGPAQ9UK23 515 aa9.76□□□□□ -0.85
APP-213ENST00000464867 STRIP2Q9ULQ0 834 aa9.76□□□□□ -0.85
APP-213ENST00000464867 VPS4AQ9UN37 437 aa9.76□□□□□ -0.85
APP-213ENST00000464867 SCML2Q9UQR0 700 aa9.76□□□□□ -0.85
APP-213ENST00000464867 UBE4BO95155 1302 aa9.76□□□□□ -0.85
APP-213ENST00000464867 F8P00451 2351 aa9.75□□□□□ -0.85
APP-213ENST00000464867 A0A1W2PQH9 124 aa9.75□□□□□ -0.85
APP-213ENST00000464867 GOLGA8IPA6NC78 632 aa9.75□□□□□ -0.85
APP-213ENST00000464867 GOLGA8JA6NMD2 632 aa9.75□□□□□ -0.85
APP-213ENST00000464867 K7ESM1 405 aa9.75□□□□□ -0.85
APP-213ENST00000464867 NVLO15381 856 aaKnown RBP9.75□□□□□ -0.85
APP-213ENST00000464867 RNGTTO60942 597 aaKnown RBP9.75□□□□□ -0.85
APP-213ENST00000464867 SIN3BO75182 1162 aa9.75□□□□□ -0.85
APP-213ENST00000464867 CLSTN1O94985 981 aa9.75□□□□□ -0.85
APP-213ENST00000464867 JMJD7P0C870 316 aa9.75□□□□□ -0.85
APP-213ENST00000464867 PABPC1P11940 636 aaKnown RBP9.75□□□□□ -0.85
APP-213ENST00000464867 C5AR1P21730 350 aa9.75□□□□□ -0.85
APP-213ENST00000464867 GARTP22102 1010 aa9.75□□□□□ -0.85
APP-213ENST00000464867 MAT2AP31153 395 aaKnown RBP9.75□□□□□ -0.85
APP-213ENST00000464867 PSMD8P48556 350 aa9.75□□□□□ -0.85
APP-213ENST00000464867 CD97P48960 835 aa9.75□□□□□ -0.85
APP-213ENST00000464867 MAP3K7CLP57077 242 aa9.75□□□□□ -0.85
APP-213ENST00000464867 ZNF445P59923 1031 aa9.75□□□□□ -0.85
APP-213ENST00000464867 EHHADHQ08426 723 aa9.75□□□□□ -0.85
APP-213ENST00000464867 DYMQ7RTS9 669 aa9.75□□□□□ -0.85
APP-213ENST00000464867 ADIPOR2Q86V24 386 aa9.75□□□□□ -0.85
APP-213ENST00000464867 NECAB1Q8N987 351 aa9.75□□□□□ -0.85
APP-213ENST00000464867 CALML4Q96GE6 196 aa9.75□□□□□ -0.85
APP-213ENST00000464867 C8orf76Q96K31 380 aa9.75□□□□□ -0.85
APP-213ENST00000464867 ACCSQ96QU6 501 aa9.75□□□□□ -0.85
APP-213ENST00000464867 EPB41L5Q9HCM4 733 aa9.75□□□□□ -0.85
APP-213ENST00000464867 ZNF71Q9NQZ8 489 aaPredicted RBP9.75□□□□□ -0.85
APP-213ENST00000464867 OSER1Q9NX31 292 aa9.75□□□□□ -0.85
APP-213ENST00000464867 TFIP11Q9UBB9 837 aaKnown RBP9.75□□□□□ -0.85
APP-213ENST00000464867 TARSL2A2RTX5 802 aaKnown RBP9.74□□□□□ -0.85
APP-213ENST00000464867 GNB5O14775 395 aa9.74□□□□□ -0.85
APP-213ENST00000464867 MTSS1O43312 755 aa9.74□□□□□ -0.85
APP-213ENST00000464867 GIMD1P0DJR0 217 aa9.74□□□□□ -0.85
APP-213ENST00000464867 HOXD9P28356 352 aaPredicted RBP9.74□□□□□ -0.85
APP-213ENST00000464867 UGT1A5P35504 534 aa9.74□□□□□ -0.85
APP-213ENST00000464867 DDIT3P35638 169 aa9.74□□□□□ -0.85
APP-213ENST00000464867 DCTP40126 519 aa9.74□□□□□ -0.85
APP-213ENST00000464867 PSMA6P60900 246 aaKnown RBP9.74□□□□□ -0.85
APP-213ENST00000464867 HNRNPKP61978 463 aaKnown RBP eCLIP9.74□□□□□ -0.85
APP-213ENST00000464867 PPP2CBP62714 309 aa9.74□□□□□ -0.85
APP-213ENST00000464867 PPP2CAP67775 309 aa9.74□□□□□ -0.85
APP-213ENST00000464867 EFEMP1Q12805 493 aa9.74□□□□□ -0.85
APP-213ENST00000464867 NR0B2Q15466 257 aa9.74□□□□□ -0.85
APP-213ENST00000464867 HNRNPA1L2Q32P51 320 aaKnown RBP9.74□□□□□ -0.85
APP-213ENST00000464867 POM121L1PQ3SYA9 428 aa9.74□□□□□ -0.85
APP-213ENST00000464867 GUSBP11Q6P575 273 aa9.74□□□□□ -0.85
APP-213ENST00000464867 CRTC1Q6UUV9 634 aa9.74□□□□□ -0.85
APP-213ENST00000464867 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.74□□□□□ -0.85
APP-213ENST00000464867 ZNF720Q7Z2F6 126 aa9.74□□□□□ -0.85
APP-213ENST00000464867 HEATR4Q86WZ0 1026 aa9.74□□□□□ -0.85
APP-213ENST00000464867 ZNF276Q8N554 614 aa9.74□□□□□ -0.85
APP-213ENST00000464867 ZNF557Q8N988 423 aaPredicted RBP9.74□□□□□ -0.85
APP-213ENST00000464867 OR5B17Q8NGF7 314 aa9.74□□□□□ -0.85
APP-213ENST00000464867 NAT6Q93015 286 aa9.74□□□□□ -0.85
APP-213ENST00000464867 TMA16Q96EY4 203 aaKnown RBP9.74□□□□□ -0.85
APP-213ENST00000464867 IFT43Q96FT9 208 aa9.74□□□□□ -0.85
APP-213ENST00000464867 CALN1Q9BXU9 219 aa9.74□□□□□ -0.85
APP-213ENST00000464867 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
APP-213ENST00000464867 MTG2Q9H4K7 406 aa9.74□□□□□ -0.85
APP-213ENST00000464867 MRPL44Q9H9J2 332 aaKnown RBP9.74□□□□□ -0.85
APP-213ENST00000464867 NMUR1Q9HB89 426 aa9.74□□□□□ -0.85
APP-213ENST00000464867 ARHGAP20Q9P2F6 1191 aa9.74□□□□□ -0.85
APP-213ENST00000464867 CYTH4Q9UIA0 394 aa9.74□□□□□ -0.85
APP-213ENST00000464867 NME7Q9Y5B8 376 aa9.74□□□□□ -0.85
APP-213ENST00000464867 PCDHA5Q9Y5H7 936 aa9.74□□□□□ -0.85
APP-213ENST00000464867 COL27A1Q8IZC6 1860 aaPredicted RBP9.73□□□□□ -0.85
APP-213ENST00000464867 LY6G6EA0A0G2JKS1 128 aa9.73□□□□□ -0.85
APP-213ENST00000464867 EME2A4GXA9 379 aaPredicted RBP9.73□□□□□ -0.85
APP-213ENST00000464867 ZNF233A6NK53 670 aa9.73□□□□□ -0.85
APP-213ENST00000464867 MUSKO15146 869 aa9.73□□□□□ -0.85
APP-213ENST00000464867 NEBLO76041 1014 aa9.73□□□□□ -0.85
APP-213ENST00000464867 DDAH2O95865 285 aa9.73□□□□□ -0.85
APP-213ENST00000464867 IL1BP01584 269 aa9.73□□□□□ -0.85
APP-213ENST00000464867 ASLP04424 464 aa9.73□□□□□ -0.85
APP-213ENST00000464867 TRPC3Q13507 836 aa9.73□□□□□ -0.85
APP-213ENST00000464867 IL17AQ16552 155 aa9.73□□□□□ -0.85
APP-213ENST00000464867 PAQR9Q6ZVX9 377 aa9.73□□□□□ -0.85
APP-213ENST00000464867 RSRC2Q7L4I2 434 aaKnown RBP9.73□□□□□ -0.85
APP-213ENST00000464867 MAMDC2Q7Z304 686 aaPredicted RBP9.73□□□□□ -0.85
APP-213ENST00000464867 TRAPPC11Q7Z392 1133 aa9.73□□□□□ -0.85
APP-213ENST00000464867 GPD1LQ8N335 351 aa9.73□□□□□ -0.85
APP-213ENST00000464867 AADATQ8N5Z0 425 aa9.73□□□□□ -0.85
APP-213ENST00000464867 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.73□□□□□ -0.85
APP-213ENST00000464867 ZSWIM2Q8NEG5 633 aa9.73□□□□□ -0.85
APP-213ENST00000464867 RASSF8Q8NHQ8 419 aa9.73□□□□□ -0.85
APP-213ENST00000464867 HTR3CQ8WXA8 447 aa9.73□□□□□ -0.85
APP-213ENST00000464867 CATSPER2Q96P56 530 aa9.73□□□□□ -0.85
APP-213ENST00000464867 FIZ1Q96SL8 496 aa9.73□□□□□ -0.85
APP-213ENST00000464867 IL12RB2Q99665 862 aa9.73□□□□□ -0.85
APP-213ENST00000464867 SMOQ99835 787 aa9.73□□□□□ -0.85
APP-213ENST00000464867 SRRTQ9BXP5 876 aaKnown RBP9.73□□□□□ -0.85
APP-213ENST00000464867 IKZF4Q9H2S9 585 aa9.73□□□□□ -0.85
APP-213ENST00000464867 CSNK1G1Q9HCP0 422 aa9.73□□□□□ -0.85
APP-213ENST00000464867 DNAJC28Q9NX36 388 aa9.73□□□□□ -0.85
APP-213ENST00000464867 CLIC5Q9NZA1 410 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms