RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PPP1R2P41236 205 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 TAS2R38P59533 333 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 PIP5KL1Q5T9C9 394 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 FBXL22Q6P050 247 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 NEK5Q6P3R8 708 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 Q6ZVU0 165 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 SPACA3Q8IXA5 215 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 EHBP1Q8NDI1 1231 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 KLHDC7BQ96G42 594 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 SLC2A13Q96QE2 648 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 FEM1AQ9BSK4 669 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 FAM204AQ9H8W3 233 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 GDPD2Q9HCC8 539 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 KLHL11Q9NVR0 708 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 HS3ST2Q9Y278 367 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 OR51B4Q9Y5P0 310 aa17.77■□□□□ 0.44
HMGN1-210ENST00000464078 DXOO77932 396 aaKnown RBP17.76■□□□□ 0.43
HMGN1-210ENST00000464078 PLA2G2AP14555 144 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 DGKAP23743 735 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 CENPCQ03188 943 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 PDCLQ13371 301 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 DLG2Q15700 870 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 CDCP2Q5VXM1 449 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 TTI2Q6NXR4 508 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 TRIM59Q8IWR1 403 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF843Q8N446 348 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 SH2D3CQ8N5H7 860 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 ASNSD1Q9NWL6 643 aa17.76■□□□□ 0.43
HMGN1-210ENST00000464078 MT-CO3P00414 261 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 THEGLP0DJG4 465 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 CKMT1AP12532 417 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 KRT5P13647 590 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 MARSP56192 900 aaKnown RBP17.75■□□□□ 0.43
HMGN1-210ENST00000464078 PCBP4P57723 403 aaKnown RBP17.75■□□□□ 0.43
HMGN1-210ENST00000464078 CDK17Q00537 523 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 CCDC173Q0VFZ6 552 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 KCNMA1Q12791 1236 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 AUHQ13825 339 aaKnown RBP17.75■□□□□ 0.43
HMGN1-210ENST00000464078 C5orf22Q49AR2 442 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 ACCSLQ4AC99 568 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 PCSK4Q6UW60 755 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF248Q8NDW4 579 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 OR52K2Q8NGK3 314 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF606Q8WXB4 792 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 IFT43Q96FT9 208 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 HIC2Q96JB3 615 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF578Q96N58 590 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-210ENST00000464078 RPRD1AQ96P16 312 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-210ENST00000464078 DDIT4Q9NX09 232 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 VPS28Q9UK41 221 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 CA5BQ9Y2D0 317 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 TBC1D30Q9Y2I9 924 aa17.75■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-210ENST00000464078 CAPN8A6NHC0 703 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 ERVH48-1M5A8F1 160 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 LZTS3O60299 673 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-210ENST00000464078 HSF2BPO75031 334 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 CLDN11O75508 207 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 LETM1O95202 739 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-210ENST00000464078 ZIC2O95409 532 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-210ENST00000464078 GP1BAP07359 652 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 GIMD1P0DJR0 217 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 CD44P16070 742 aaKnown RBP17.74■□□□□ 0.43
HMGN1-210ENST00000464078 NUMBP49757 651 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 IRAK1P51617 712 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 DAB2P98082 770 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 CCDC15Q0P6D6 951 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF177Q13360 481 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-210ENST00000464078 TAF5Q15542 800 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 HS1BP3Q53T59 392 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 KDM7AQ6ZMT4 941 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 ENOSF1Q7L5Y1 443 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 HORMAD1Q86X24 394 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 TIGD1Q96MW7 591 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 LGMNQ99538 433 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 INTS2Q9H0H0 1204 aaKnown RBP17.74■□□□□ 0.43
HMGN1-210ENST00000464078 USP29Q9HBJ7 922 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 UCKL1Q9NWZ5 548 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 HOOK1Q9UJC3 728 aaKnown RBP17.74■□□□□ 0.43
HMGN1-210ENST00000464078 PCDHB1Q9Y5F3 818 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 PIEZO2Q9H5I5 2752 aa17.74■□□□□ 0.43
HMGN1-210ENST00000464078 A0A1W2PQU0 124 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 OPA1O60313 960 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 PIAS2O75928 621 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 GNA14O95837 355 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 SRCP12931 536 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 PRLRP16471 622 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF18P17022 549 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 GNA15P30679 374 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 UCNP55089 124 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 CXADRP78310 365 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 KCNH2Q12809 1159 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 ZNF284Q2VY69 593 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 POM121L1PQ3SYA9 428 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 EFHC1Q5JVL4 640 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 ABI3BPQ7Z7G0 1075 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 DEFB106AQ8N104 65 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 LSMEM2Q8N112 164 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 TMIEQ8NEW7 156 aa17.73■□□□□ 0.43
HMGN1-210ENST00000464078 FAM174AQ8TBP5 190 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms